Pairwise Alignments

Query, 343 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 349 a.a., Periplasmic binding protein/LacI transcriptional regulator (NCBI) from Rhodospirillum rubrum S1H

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 29/360 (8%)

Query: 2   IKTIMKSSALAAALLAGTVLASGAAHAENQ---------------IAFIPKLVGVGFFTS 46
           +K  + S  LAA+L+AG  LA+ A    +Q               IA + K+ G+ +F  
Sbjct: 1   MKKFLSSLVLAASLVAGPALAADAPVDVSQVPKGFSAKDVGKSYSIATVVKVDGIAWFDR 60

Query: 47  GGAGAVKAGEEVGAKVTYDGPTEPSVSGQVQFINNFVNQGYNALIVSSVSPDGLCPALKR 106
              GA + G + G      GP++   + QVQ + N + QG +A+ V   S + L P LK+
Sbjct: 61  MREGAKQFGADTGHDTWMVGPSQADAAAQVQLVENLIAQGVDAICVVPFSVEALEPVLKK 120

Query: 107 AMERGVLVMTWDSDVNPDCRSYYINQGTPEQLGGLLVDMAAEGVKKEKAKVAFFYSSPTV 166
           A +RG++V+  ++  N     + +        G  L+++    +K E  K      S T 
Sbjct: 121 ARDRGIVVIAHEAS-NITNADFVLEAFDNLAYGAKLMEVLGTYMKGE-GKYVTTVGSLTS 178

Query: 167 TDQNAWAEAAKAKIAKEHPGWEIVTTQY-GYNDAQKSLQTAESILQTYPDLDAIIAPDAN 225
             QN W + A A      P  E  T +   Y+DA       + +L TYPD+  I+     
Sbjct: 179 KSQNEWIDGAIAYQKAHFPKMEQATGRLETYDDANTDYNKLKEVLTTYPDIKGILGGPMP 238

Query: 226 ALPAAAQAAENLKRAEGVTIVGFSTPNVMRPYIERGTIQRFGLWDVTQQGKISVFVADHV 285
               A +        + +   G    +V   Y+ +G IQ    WD          VA   
Sbjct: 239 TSAGAGRLISERGLKDKLFFAGTGLVSVAGEYLSKGDIQYIQFWDPAVAAYAMNIVAVMA 298

Query: 286 L--KNGPMKVGEKLEIPGVGTVEVSANKVQGYDYEADGNGIILLPERTVFTKENIGNFDF 343
           L  K   +K G  L +PG  ++      V G D    G G + +      TK+N+ +++F
Sbjct: 299 LDGKADQIKAGLNLGLPGYTSLTA---PVAGKDKLLYGAGWVGV------TKDNMEDYNF 349