Pairwise Alignments

Query, 325 a.a., C4-dicarboxylate transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

Subject, 348 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  116 bits (290), Expect = 9e-31
 Identities = 87/311 (27%), Positives = 152/311 (48%), Gaps = 10/311 (3%)

Query: 4   LIAAAAMAALSFCGI----ANAQEYSLRFSTSQVNPNEPIIKAMKTYAERVGERSGGRIA 59
           L A A  AAL    I    ANA E++ +F+T Q +P+ P+ K  +   +R+ E +GGR+ 
Sbjct: 19  LKAGAVGAALPLFSIMSRPANAAEFNYKFATGQ-DPSHPVNKRAQQAIDRIREATGGRLD 77

Query: 60  ITVMTGDQLGAQKKVNEMVMSGASLLSATDYGQLGQFVPDLSILAGPYVYPDLAATDRLF 119
           I +   +QLG+   +   + +G           L   VP   I+   + + D     +  
Sbjct: 78  IKLFPANQLGSDTDLMSQIRNGGVEFFNQASVVLSTLVPAAGIVNTGFAFHDYKEVWQAM 137

Query: 120 ASDLYKDLSGKLEARGIKIIMPNGLFGYRHIIAN-KPVRSPADLAGVTIRVPSSPIMMAT 178
              L   +  ++E  G+  +      G+R I  + KP+++ ADL G+ +RVP++P++ + 
Sbjct: 138 DGPLGAYVRAQIEKVGLLTMSKPWDNGFRQITTSTKPIKTAADLKGLKLRVPAAPMLTSL 197

Query: 179 FGNYGARPTELPWGDVYNALQTGVVDAAEGPFGSIAGAKLNETRKVISKTGHQIMFTAWV 238
           F   GA PT + + +VY++LQT +V+  E P   I+ A+L E +K  + + H +    W+
Sbjct: 198 FSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFCTISNH-VWDAYWI 256

Query: 239 -ASSQFFNSLPEDLQTILLEEGQTIAKELTQMTLETDDAYAKQLAASGVEIVTDVDIPSF 297
             + + F  LP+D+Q I+  E    A +               L   GV+I+ + D  SF
Sbjct: 257 LGNRRAFEKLPKDIQEIVRRELDKAATDERADIASLSGFARNDLQGKGVQII-EADKNSF 315

Query: 298 IEA-SRAAYEK 307
            EA +R ++ K
Sbjct: 316 KEALARGSFYK 326