Pairwise Alignments

Query, 355 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 339 a.a., Ribose operon repressor from Pseudomonas fluorescens FW300-N2E2

 Score =  129 bits (324), Expect = 1e-34
 Identities = 96/334 (28%), Positives = 161/334 (48%), Gaps = 14/334 (4%)

Query: 13  IKALAEATGYSIATVSKALNGSPMVAPATKALIHRAAADIGYRANARGMALRTGRTCQAA 72
           IK +A   G S  TVS  +N +  V+   +  +  A   + Y  +A   +L+   T    
Sbjct: 4   IKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIERLDYVPSAVARSLKAKTTATIG 63

Query: 73  VLMPVTAARDYEWDGVEYTQILSGISQALEGSDYRMSVHVVRNVEDGCEVAR---RIIDE 129
           +L+P  +   Y      + ++  GI    E + Y +   ++ N +D  +  R   R++ E
Sbjct: 64  LLVP-NSLNPY------FAELARGIEDYCERNGYCV---ILCNSDDNPDKQRSYLRVLLE 113

Query: 130 GLADGLIFSGIRADDPRIDLLDESRFPFVSLGRCRKPLDYAHVDIDNEWAAHAATARLIA 189
              DGLIF+    D    + L   R P V + R  + +D   V ID+E+ A+ AT  L+ 
Sbjct: 114 KRIDGLIFASAGGDVGLAEGLSNVRTPMVIVDRGLEGVDADLVRIDHEYGAYLATRHLLE 173

Query: 190 GGHRRIALVNPLRHLSYAEDRVDGFLRAFREANLSPSDDLIAEGDLSTHFGRESALGLLD 249
            GHR IA +    + S A+ R+ G+ RA +EA +    + + E D ++  G  +A  LL 
Sbjct: 174 LGHRDIAFIGGPANTSVAQMRLAGYCRALKEAGIELPVERMLESDFTSTGGYRAAAQLL- 232

Query: 250 AARPPTAFVCSNESTTLGVLSGLGSRGRRIGVDVDVVAYDDINVSAYFTPPITTFYQPIE 309
             +PP+A   +N+   +GVL     R  R+  ++ V+ +DDI +S Y  P +TT  Q I 
Sbjct: 233 VQQPPSAIFAANDMIGIGVLRAAAERNVRVPSELSVIGFDDIQMSRYVYPALTTVGQSIL 292

Query: 310 VLGRTLGEFLLRRMAGEDARSLKQVFRPRLIERQ 343
            LG    E LLRR+A     + +++  P ++ R+
Sbjct: 293 QLGEMAAEVLLRRIATPGLATEQRIVTPSIVLRE 326