Pairwise Alignments

Query, 421 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 492 a.a., Type I secretion membrane fusion protein, HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score = 57.4 bits (137), Expect = 9e-13
 Identities = 46/201 (22%), Positives = 97/201 (48%), Gaps = 6/201 (2%)

Query: 194 ARLLAEIGKRDTIPMPEEL----KNVPDAEKLLDSETALMESRDKRQKRQLDALADLRSL 249
           ARL+AE  ++ TI  P +L    K  P+  ++L ++    + R K  + Q+  L    + 
Sbjct: 166 ARLVAERDEQKTITFPPDLIAVAKLKPETAEILQAQQQQFDERHKSIEGQVAILQKRIAQ 225

Query: 250 LQSEIEALAKKAETQARQLELATEDRDKVDSLAEKGLALSQRKLSLEQRVADVQASLLDI 309
            + EIE L  + +++ RQLE+  ++   +  L  KG     R L++E+ +  ++   +  
Sbjct: 226 SRQEIEGLKVQRQSKKRQLEIFQDEIVGLRELLAKGYTPRTRILAMEREMTRLEGE-VGT 284

Query: 310 DTASL-KAKQDASKAAQDETNLRNDWDAQLAQELQNTEAELDTLTLKLGTSRDLMTEALL 368
           DT+S+ +A+Q   +A       R  +   +  +L+  + +L  L  +   + D+++  +L
Sbjct: 285 DTSSMARAEQAVGEAELQIIQTRQQFREDVVGQLREVQTKLSELRERGTVATDVLSRTVL 344

Query: 369 QSADAAQLEEQAAEITYSIIR 389
            ++ A  ++  A      II+
Sbjct: 345 LASQAGVIQNLAVHTLGGIIK 365