Pairwise Alignments
Query, 907 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 1092 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2
Score = 84.7 bits (208), Expect = 3e-20
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 434 RRQAEEQLRRNEANERARAAELAAIMEAVPALIWIARTPDCRVISGNNSSYEILRLP-HD 492
+R+ E+ LR +E A + P ++ + R D + N + P HD
Sbjct: 146 QREREQALRSSEKR-------FATLFHLSPNMVLLTRQEDGMISEANQYFESLFGWPLHD 198
Query: 493 S------NLSMSAPPGEHPTNFRVFSEGRALSPEELPVQRAARGEEVQNFEEEVRFDDGS 546
L + PG+ V ARGE + + E E+R +G
Sbjct: 199 VIGRTTLELGLWVDPGQRVKLLEVIK---------------ARGE-LASMEVELRASNGQ 242
Query: 547 SRHIFGNATPLRDVTGEVVGAVAAAVDITGRKQAEEALQESERRLQLALDAGHMGAWEWN 606
+A + ++ G+ ++ +D T K AE+AL++S+ RL LALD+ +G W+W+
Sbjct: 243 IHTGLLSAQKV-ELEGQPY-LLSTFLDTTEHKLAEQALKDSQERLDLALDSAQLGTWDWH 300
Query: 607 LETGEVIWSPGLEALHRIEPGSFGGTLADFKRDIHPDDLPLIEREMARAIETD--GDYHV 664
+ +G + S LH +EP F + F + P + R R++ G+Y +
Sbjct: 301 IPSGMLYGSARAAQLHGLEPKPFHESFDAFFEGV-PTEERNNMRNAYRSLREGPAGNYQL 359
Query: 665 VYRAQLPDGTIRWMEAFGQLSPR-NGPKRRLTGVCMDITERREAE 708
YR QLPDG+ R++E+ +L +G R+ G +DIT++ E E
Sbjct: 360 TYRVQLPDGSSRYLESRARLYRNDDGSPLRMAGTLLDITDQVERE 404
Score = 67.8 bits (164), Expect = 4e-15
Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Query: 578 KQAEEALQESERRLQLALDAGHMGAWEWNLETGEVIWSPGLEALHRIEPGSFGGTLADFK 637
K++E++ +S ++L AL+ +GAW W++++G++ WS G +AL +P D+
Sbjct: 20 KRSEQSW-DSAQQLLAALNGARLGAWSWDIDSGQISWSRGTQALFGFDPRQPLPADVDYL 78
Query: 638 RDIHPDDLPLIEREMARAIE-TDGDYHVVYRAQLPDGTIRWMEAFGQLSPRNGPKRRLTG 696
+ P+D R A+ + + +R PDG++ W+E G + P + R+ G
Sbjct: 79 DLLLPEDRARAVRAFHAAVAGAPLEQAMHHRIVWPDGSLHWLEISGSVLPDKHGRPRMIG 138
Query: 697 VCMDITERREAE 708
V +IT +RE E
Sbjct: 139 VIREITHQRERE 150
Score = 41.2 bits (95), Expect = 4e-07
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 143 MERSSRYLAAIVESSDDAIVAKNLD-GIITSWNRGAQRLFGYAAEEVIGESITILIPPER 201
++ S A SS DAI L+ G N G RL GY A+EVIG ++ +
Sbjct: 532 LKASEEKFAKAFHSSPDAITITELESGRYLEVNDGFCRLTGYRADEVIGHTVYEVGIWAE 591
Query: 202 LSEEPGILERIRRGELVDHFETKRRRKDGTLVDISLTVSPV 242
+ +L +R V H E R K G ++ + ++V P+
Sbjct: 592 EKQRAALLAELRLKGRVVHQEMLGRNKRGEILTVEVSVEPI 632
Score = 40.4 bits (93), Expect = 6e-07
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 146 SSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIG---ESITILIPPERL 202
S++ L A + + + ++D SW+RG Q LFG+ + + + + +L+P +R
Sbjct: 28 SAQQLLAALNGARLGAWSWDIDSGQISWSRGTQALFGFDPRQPLPADVDYLDLLLPEDRA 87
Query: 203 SEEPGILERIRRGELVDHFETKRRRKDGTL--VDISLTVSPVRDATGRIIGASKIARDIT 260
+ L + DG+L ++IS +V P + R+IG + R+IT
Sbjct: 88 RAVRAFHAAVAGAPLEQAMHHRIVWPDGSLHWLEISGSVLPDKHGRPRMIG---VIREIT 144
Query: 261 ETKSAAEALAARFREQAALYRLTERVQRTKRIEE 294
+ +AL + + A L+ L+ + R E+
Sbjct: 145 HQREREQALRSSEKRFATLFHLSPNMVLLTRQED 178
Score = 32.3 bits (72), Expect = 2e-04
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 104 VRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSGAKDMERS-----SRYLAAIVESSD 158
V PDG S+ L + D + V+ +++ ++ E++ R+ S +
Sbjct: 111 VWPDG-SLHWLEISGSVLPDKHGRPRMIGVIREITHQREREQALRSSEKRFATLFHLSPN 169
Query: 159 DAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESITILIPPERLSEEPG----ILERIR- 213
++ + DG+I+ N+ + LFG+ +VIG + L L +PG +LE I+
Sbjct: 170 MVLLTRQEDGMISEANQYFESLFGWPLHDVIGRTTLEL----GLWVDPGQRVKLLEVIKA 225
Query: 214 RGELVDHFETKRRRKDGTLVDISLTVSPVRDATGRIIGASKIARDITETKSAAEAL 269
RGEL E + R +G + L+ V + G+ S D TE K A +AL
Sbjct: 226 RGELAS-MEVELRASNGQIHTGLLSAQKV-ELEGQPYLLSTFL-DTTEHKLAEQAL 278
Score = 30.8 bits (68), Expect = 5e-04
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 540 VRFDDGSSRHIFGNATPLRDVTGEVVGAVAAAVDITGRKQAEEALQESERR 590
V+ DGSSR++ A R+ G + +DIT + + E++L SE +
Sbjct: 363 VQLPDGSSRYLESRARLYRNDDGSPLRMAGTLLDITDQVEREQSLAASEEK 413