Pairwise Alignments
Query, 907 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 727 a.a., Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) from Pseudomonas fluorescens FW300-N2E2
Score = 160 bits (405), Expect = 3e-43
Identities = 135/468 (28%), Positives = 213/468 (45%), Gaps = 38/468 (8%)
Query: 445 EANERARAAELAAIMEAVPALIWIARTP-DCRVISGNNSSYEILRLPHDSNLSMSAPPGE 503
EA + L+A EA A I IA D R++ N++ +L + LSM+
Sbjct: 270 EAARQDSDDRLSATYEA--ATIGIAEADVDGRLLRVNDALCNMLGRSREQLLSMTFLDYT 327
Query: 504 HPTNFRVFSEGRALSPEELPVQRAARGEEVQNFEEEVRF--DDGSSRHIFGNATPLRDVT 561
HP P++ + E+ N+ R DG ++ +++ +RD
Sbjct: 328 HPDCI----------PQDAGLYARQVAGELDNYVLRKRAVKPDGEVVYLDIHSSSVRDAN 377
Query: 562 GEVVGAVAAAVDITGRKQAEEALQESERRLQLALDAGHMGAWEWNLETGEVIW------- 614
G V D+T ++ E L+ESER ++ L+A + + + G + +
Sbjct: 378 GTFRYGVRVLQDVTLARRMENQLRESERHMRNLLEALPAAVYTTDAD-GRITFYNRAAVE 436
Query: 615 ----SPGLEALHRIEPGSFGGTLADFKRDIHPDDLPLIEREMARAIETDGDYHVVYRAQL 670
+P L + + F D P + L E R +E A+
Sbjct: 437 LSGRTPHLGDMWCVTWKLFNTDGTALPHDQCPMAVALKENRPIRGVEAV--------AER 488
Query: 671 PDGT-IRWMEAFGQLSPRNGPKRRLTGVCMDITERREAEAQRNLLVAELSHRVKNTLAIV 729
PDG+ + + L +G + +DI+ER++AE ++ L+ EL+HRVKNTLA V
Sbjct: 489 PDGSRVPFTPYPTPLHDADGNLVGAINMLVDISERKQAENRQKTLIDELNHRVKNTLATV 548
Query: 730 GSIARQTFSTNPDAKAAHRSFDARIRALAQTHTRLAEASWSGVSLKTVLFDELSPYHDDS 789
S+A QT DAK +R F+AR+ AL++ H L + W L T+ + L P
Sbjct: 549 QSLAAQTARNAEDAKDGYRRFEARLLALSRAHDLLTKRHWGQTPLDTLAHEVLMPVFGHE 608
Query: 790 RTNVTLAGPPAMLPPKHALTLGMAAHELATNAAKHGALSVRSGKVDIEWMID--VASERL 847
+ + GP A + + AL L M +ELA NA K+GA+SV SG + + W + L
Sbjct: 609 PGRIVIEGPSADVGTRVALNLTMTLNELAINALKYGAMSVESGTLAVTWHLQARTGGTLL 668
Query: 848 RICWSETGGPAVVAPKHNGFGRLLLERVLASDLGGEVHLEFAPQGLVC 895
+ WSE GGP V P+ G G L++R + DL G+ L +APQG+ C
Sbjct: 669 TLDWSEQGGPPVSPPEREGLGSRLMQRCIERDLAGKFDLTYAPQGVCC 716
Score = 140 bits (353), Expect = 3e-37
Identities = 66/127 (51%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
Query: 24 RAVLDALAVPVYATDAEGIVTYCNAAAAAVAGREPELGKDRWCVSWQLRRPDGSPLPHDE 83
R +L+AL VY TDA+G +T+ N AA ++GR P LG D WCV+W+L DG+ LPHD+
Sbjct: 408 RNLLEALPAAVYTTDADGRITFYNRAAVELSGRTPHLG-DMWCVTWKLFNTDGTALPHDQ 466
Query: 84 CPMARTLKEGQPVRGEEVVAVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSGAKDM 143
CPMA LKE +P+RG E VA RPDG+ VP P+PTP+ D G L GA+N+L+D+S K
Sbjct: 467 CPMAVALKENRPIRGVEAVAERPDGSRVPFTPYPTPLHDADGNLVGAINMLVDISERKQA 526
Query: 144 ERSSRYL 150
E + L
Sbjct: 527 ENRQKTL 533
Score = 105 bits (261), Expect = 1e-26
Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 25 AVLDALAVPVYATDAEGIVTYCNAAAAAVAGREPELGK--DRWCVSWQLRRPDGSPLPHD 82
+ LDA+ VY D +G + N+ AA + GR P LG+ DR+C + +L DG PL +
Sbjct: 26 SALDAIPGAVYLCDRKGGLVRYNSEAAELWGRAPALGENGDRFCGAHRLFLTDGRPLAFE 85
Query: 83 ECPMARTLKEGQPVRGEEVVAVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSG--- 139
CP A L G R +EV+ RPDG+ L + + D G + G +N D+S
Sbjct: 86 HCPTALALNTGIASRNQEVLIERPDGSRFVALMNIRALKDCRGVIQGVINCFQDVSAHHA 145
Query: 140 -AKDMERSSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESITILIP 198
A+++ R S L E+S + + +GII N+ L GY+A+E IG IT
Sbjct: 146 MAEELRRKSADLEDFFENSAVGLHIVSSEGIILRANKAELALLGYSADEYIGRHIT---- 201
Query: 199 PERLSEEP---GILERIRRGELVDHFETKRRRKDGTLVDISLT 238
E +EP IL ++ G+ + + + R KDG++ + +T
Sbjct: 202 -EFHVDEPVIGDILTKLGSGDCLQSYPARLRAKDGSIKHVMIT 243
Score = 63.5 bits (153), Expect = 4e-14
Identities = 69/281 (24%), Positives = 114/281 (40%), Gaps = 34/281 (12%)
Query: 25 AVLDALAVPVYATDAEGIVTYCNAAAAAVAGREPELGKDRWCVSWQLRRPDGSPLPHDEC 84
A +A + + D +G + N A + GR E QL H +C
Sbjct: 282 ATYEAATIGIAEADVDGRLLRVNDALCNMLGRSRE----------QLLSMTFLDYTHPDC 331
Query: 85 PMARTLKEGQPVRGE------EVVAVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLS 138
+ V GE AV+PDG V L H + + D G V VL D++
Sbjct: 332 IPQDAGLYARQVAGELDNYVLRKRAVKPDGEVVYLDIHSSSVRDANGTFRYGVRVLQDVT 391
Query: 139 GAKDME----RSSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESIT 194
A+ ME S R++ ++E+ A+ + DG IT +NR A L G +G+
Sbjct: 392 LARRMENQLRESERHMRNLLEALPAAVYTTDADGRITFYNRAAVELSGRTPH--LGDMWC 449
Query: 195 I---LIPPERLS---EEPGILERIRRGELVDHFETKRRRKDGTLVDISLTVSPVRDATGR 248
+ L + + ++ + ++ + E R DG+ V + +P+ DA G
Sbjct: 450 VTWKLFNTDGTALPHDQCPMAVALKENRPIRGVEAVAERPDGSRVPFTPYPTPLHDADGN 509
Query: 249 IIGASKIARDITETKSAAEALAARFREQAALYRLTERVQRT 289
++GA + DI+E K A R++ + L RV+ T
Sbjct: 510 LVGAINMLVDISERKQAEN------RQKTLIDELNHRVKNT 544
Score = 50.4 bits (119), Expect = 4e-10
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 435 RQAEEQLRRNEANERARAAELAAIMEAVPALIWIARTPDCRVISGNNSSYEIL-RLPHDS 493
R+ E QLR +E + R ++EA+PA ++ D R+ N ++ E+ R PH
Sbjct: 394 RRMENQLRESERHMRN-------LLEALPAAVYTTDA-DGRITFYNRAAVELSGRTPHLG 445
Query: 494 NLSMSAPPGEHPTNFRVFS-EGRALSPEELPVQRAAR-GEEVQNFEEEVRFDDGSSRHIF 551
++ +++F+ +G AL ++ P+ A + ++ E DGS
Sbjct: 446 DMWC--------VTWKLFNTDGTALPHDQCPMAVALKENRPIRGVEAVAERPDGSRVPFT 497
Query: 552 GNATPLRDVTGEVVGAVAAAVDITGRKQAE 581
TPL D G +VGA+ VDI+ RKQAE
Sbjct: 498 PYPTPLHDADGNLVGAINMLVDISERKQAE 527
Score = 47.8 bits (112), Expect = 3e-09
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 530 GEEVQNFEEEVRFDDGSSRHIFGNATPLRDVTGEVVGAVAAAVDITGRKQAEEALQESER 589
G+ +Q++ +R DGS +H+ + R G++ +D +G AE A Q+S+
Sbjct: 220 GDCLQSYPARLRAKDGSIKHVMITSNG-RFEDGKLFNTRCFTIDRSGVHAAEAARQDSDD 278
Query: 590 RLQLALDAGHMGAWEWNLETGEVIWSPGL-EALHRIEPGSFGGTLADFKRDIHPDDLPLI 648
RL +A +G E +++ + + L L R T D+ HPD +P
Sbjct: 279 RLSATYEAATIGIAEADVDGRLLRVNDALCNMLGRSREQLLSMTFLDY---THPDCIPQD 335
Query: 649 EREMARAIETDGDYHVV-YRAQLPDGTIRWMEAF-GQLSPRNGPKRRLTGVCMDITERRE 706
AR + + D +V+ RA PDG + +++ + NG R V D+T R
Sbjct: 336 AGLYARQVAGELDNYVLRKRAVKPDGEVVYLDIHSSSVRDANGTFRYGVRVLQDVTLARR 395
Query: 707 AEAQ--------RNLLVA 716
E Q RNLL A
Sbjct: 396 MENQLRESERHMRNLLEA 413
Score = 46.2 bits (108), Expect = 7e-09
Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 13/235 (5%)
Query: 31 AVPVYATDAEGIVTYCNAAAAAVAGREPELGKDRWCVSWQLRRPDGSPLPHDECPMARTL 90
AV ++ +EGI+ N A A+ G + R + + P + L
Sbjct: 165 AVGLHIVSSEGIILRANKAELALLGYSADEYIGRHITEFHVDEPVIGDI-------LTKL 217
Query: 91 KEGQPVRGEEVVAVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSGAKDMER----S 146
G ++ DG+ ++ F+D G L +D SG E S
Sbjct: 218 GSGDCLQSYPARLRAKDGSIKHVMITSNGRFED-GKLFNTRCFTIDRSGVHAAEAARQDS 276
Query: 147 SRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESITILIPPERLSEEP 206
L+A E++ I ++DG + N + G + E+++ + P+ + ++
Sbjct: 277 DDRLSATYEAATIGIAEADVDGRLLRVNDALCNMLGRSREQLLSMTFLDYTHPDCIPQDA 336
Query: 207 GILERIRRGELVDHFETKRRRK-DGTLVDISLTVSPVRDATGRIIGASKIARDIT 260
G+ R GEL ++ KR K DG +V + + S VRDA G ++ +D+T
Sbjct: 337 GLYARQVAGELDNYVLRKRAVKPDGEVVYLDIHSSSVRDANGTFRYGVRVLQDVT 391
Score = 27.7 bits (60), Expect = 0.003
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 512 SEGRALSPEELPVQRAAR-GEEVQNFEEEVRFDDGSSRHIFGNATPLRDVTGEVVGAVAA 570
++GR L+ E P A G +N E + DGS N L+D G + G +
Sbjct: 77 TDGRPLAFEHCPTALALNTGIASRNQEVLIERPDGSRFVALMNIRALKDCRGVIQGVINC 136
Query: 571 AVDITGRKQAEEALQESERRLQ 592
D++ E L+ L+
Sbjct: 137 FQDVSAHHAMAEELRRKSADLE 158