Pairwise Alignments
Query, 907 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 1560 a.a., Multi-sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H
Score = 110 bits (275), Expect = 7e-28
Identities = 60/167 (35%), Positives = 97/167 (58%), Gaps = 9/167 (5%)
Query: 141 KDMERSSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESIT-ILIPP 199
+++ ++ L+ IVE+S DAI+ + LDG I WNR A+ LFGY A EVIG+++ +LIP
Sbjct: 340 REIAQAQARLSTIVENSGDAIIGEALDGTIVGWNRAAEALFGYKAPEVIGKALAPLLIPA 399
Query: 200 ERLSEEPGILERIRRGELVDHFETKRRRKDGTLVDISLTVSPVRDATGRIIGASKIARDI 259
+R++E I+ GE V F+T+R DG L D+S+T PV D G ++G + + RDI
Sbjct: 400 DRMAENQSIVLSALSGEAVMAFDTQRIHADGHLFDVSMTACPVHDRLGHVVGVANLIRDI 459
Query: 260 TETKSAAEALA---ARFREQAALYRLTERVQRTKRIEEVYEATLDAI 303
+ K+A ++L A+ +Q A R ++ + LD++
Sbjct: 460 RKRKAAEQSLLEFNAQLEKQVA-----SRTAELEKARRALQTVLDSV 501
Score = 79.3 bits (194), Expect = 2e-18
Identities = 76/239 (31%), Positives = 120/239 (50%), Gaps = 23/239 (9%)
Query: 89 TLKEGQPVRGEEVVAVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSGAKDME---- 144
T+ G RGE V DGA L TP F + G++ V + +D++ K E
Sbjct: 683 TISAGGSWRGE-VCNKAKDGALYWLDSVLTPFFGEDGSIDRYVALRIDITDRKKAEAERN 741
Query: 145 RSSRYLAAIVESSDD-AIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESITILI-----P 198
RS+ L +++ S+ + +I+A + DG+IT +N GA++L GY+AEE++G+ LI
Sbjct: 742 RSNTLLRSVLASAREFSIIATDPDGVITIFNSGAEKLLGYSAEEMVGKQTPALIHLADQV 801
Query: 199 PER---LSEEPGI-LERIR----RGEL--VDHFETKRRRKDGTLVDISLTVSPVRDATGR 248
ER LS+E G+ +E R R E V+ E RKDG +++ L V+ +R+ GR
Sbjct: 802 AERGRSLSDEFGVPIEGFRVFVHRSERDGVEAQEWTYVRKDGGHLEVLLVVTAIREDDGR 861
Query: 249 IIGASKIARDITETKSAAEALAARFREQAALYRLTERVQRTKRIEEVYEATLDAIQGAL 307
I G +A+D++ K AL +QAA + Q + ++AI G L
Sbjct: 862 IAGYLGVAQDVSRRKEFERALV--LAKQAAEEASVVKGQFLANMSHEIRTPMNAILGML 918
Score = 42.7 bits (99), Expect = 2e-07
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 24 RAVL-DALAVPVYATDAEGIVTYCNAAAAAVAGREPE--LGKDRWCV----------SWQ 70
R+VL A + ATD +G++T N+ A + G E +GK +
Sbjct: 748 RSVLASAREFSIIATDPDGVITIFNSGAEKLLGYSAEEMVGKQTPALIHLADQVAERGRS 807
Query: 71 LRRPDGSPLPHDECPMARTLKEGQPVRGEEVVAVRPDGASVPLLPHPTPIFDDTGALTGA 130
L G P+ + R+ ++G V +E VR DG + +L T I +D G + G
Sbjct: 808 LSDEFGVPIEGFRVFVHRSERDG--VEAQEWTYVRKDGGHLEVLLVVTAIREDDGRIAGY 865
Query: 131 VNVLMDLSGAKDMERSSRYLAAIVESSDDAIVAK 164
+ V D+S K+ ER+ L +++++A V K
Sbjct: 866 LGVAQDVSRRKEFERA---LVLAKQAAEEASVVK 896
Score = 40.8 bits (94), Expect = 7e-07
Identities = 117/518 (22%), Positives = 198/518 (38%), Gaps = 84/518 (16%)
Query: 222 ETKRRRKDGTLVDISLTVSPVRD-ATGRIIGASKIARDITETKSAAEALAARFREQAALY 280
+T R G + +IS+TVSP A RI ++ I + AA A QA
Sbjct: 281 KTLTRSIFGRVWEISVTVSPAYGHAVQRIAPWVVVSLGIGASILAAGFAAVIGLNQA--- 337
Query: 281 RLTERVQRTKRIEEVYEATLDAIQGALNCDRASILLFDEAGTMRFVAARGLSEHYQRAVD 340
R E Q R+ + E + DAI G A G + RA +
Sbjct: 338 RRREIAQAQARLSTIVENSGDAIIGE--------------------ALDGTIVGWNRAAE 377
Query: 341 GHSPWITGANEPE-------PIFVENVDDAEFSRELKESIVGEGIAALGFFPLVTEGRLI 393
+ G PE P+ + AE + ++ GE + A + +G L
Sbjct: 378 A----LFGYKAPEVIGKALAPLLIPADRMAENQSIVLSALSGEAVMAFDTQRIHADGHLF 433
Query: 394 GKFMT---YYDRPHRFADSEIGMALTIARQLGFSIQRMRAEYARRQAEEQLRRNEAN--- 447
MT +DR +G + +A + +R AE + + QL + A+
Sbjct: 434 DVSMTACPVHDR--------LGHVVGVANLIRDIRKRKAAEQSLLEFNAQLEKQVASRTA 485
Query: 448 --ERARAAELAAIMEAVPALI-WIARTPDCRVISGNNSSYEILRLPHDSNLSMSAPPGEH 504
E+AR A L ++++VP++I + R C + + S+ N+ S G+
Sbjct: 486 ELEKARRA-LQTVLDSVPSMIGYWDRDLHCHIANRAYCSW--------FNVDPSGLIGKS 536
Query: 505 PTNFRVFSEGRALSPEELPVQRAARGEEVQNFEEEVRFDDGSS-RHIFGNATPLRDVTGE 563
+ G AL P A + Q FE + +G RH + P V GE
Sbjct: 537 MRSLL----GEALFTANRPFIEAVLRGQPQTFERMIPRPNGQGVRHSLAHYIP-DVVDGE 591
Query: 564 VVGAVAAAVDIT----GRKQAEEALQESERRLQLALDAGHMGAWEWNLETGEVIWSPG-- 617
V+G A D++ GR++ + AL+E+E L+ + + N G +I
Sbjct: 592 VLGFYALVHDVSELVEGRQKLDAALRENEALLRTIDEQLLCSITDRN---GNIISINDNF 648
Query: 618 LEALHRIEPGSFGGTLADFKRDIHPDDLPLIEREMARAIETDGDYHVVYRAQLPDGTIRW 677
+ + + G +H ++ I G + + DG + W
Sbjct: 649 CKLMGYTKDELLGLDHRIMNSGLHDKTF---WADVWATISAGGSWRGEVCNKAKDGALYW 705
Query: 678 MEAFGQLSP---RNGPKRRLTGVCMDITERREAEAQRN 712
+++ L+P +G R + +DIT+R++AEA+RN
Sbjct: 706 LDSV--LTPFFGEDGSIDRYVALRIDITDRKKAEAERN 741
Score = 35.4 bits (80), Expect = 3e-05
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 434 RRQAEEQLRRNEANERARAAELAAIMEAVPALIWIARTPDCRVISGNNSSYEILRLPHDS 493
R++AE + RN +N R+ +A ++ IA PD + N+ + ++L +
Sbjct: 733 RKKAEAE--RNRSNTLLRSVLASAREFSI-----IATDPDGVITIFNSGAEKLLGYSAEE 785
Query: 494 NLSMSAPPGEHPTNFRVFSEGRALSPE--------ELPVQRAAR-GEEVQNFEEEVRFDD 544
+ P H + +V GR+LS E + V R+ R G E Q + + D
Sbjct: 786 MVGKQTPALIHLAD-QVAERGRSLSDEFGVPIEGFRVFVHRSERDGVEAQEWTYVRK--D 842
Query: 545 GSSRHIFGNATPLRDVTGEVVGAVAAAVDITGRKQAEEAL 584
G + T +R+ G + G + A D++ RK+ E AL
Sbjct: 843 GGHLEVLLVVTAIREDDGRIAGYLGVAQDVSRRKEFERAL 882