Pairwise Alignments

Query, 261 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 506 a.a., ribonucleotide-diphosphate reductase subunit alpha from Burkholderia phytofirmans PsJN

 Score =  167 bits (424), Expect = 3e-46
 Identities = 88/247 (35%), Positives = 146/247 (59%), Gaps = 5/247 (2%)

Query: 8   LVEMKNISISFGGIHAVDDASVDLYPGEVVALLGHNGAGKSTLIKILSGAYKRDAGEILI 67
           ++++ NI+ SF G+ A+    +++  GE+ ALLG NGAGKSTL+KIL G Y+ D G I I
Sbjct: 4   ILKLDNITKSFPGVKALQGIHLEIERGEIHALLGENGAGKSTLMKILCGIYQPDEGTITI 63

Query: 68  NGEPAEINNPRDAKKYGIETIYQTLAVADNVDAAANLYLGRELRTPWGTLDDVAMEAKAR 127
            GE    +N  DA   G+  ++Q  ++   ++A  N++LGREL+   G L+   M   A 
Sbjct: 64  EGEARHFSNYHDAVAAGVGIVFQEFSLIPYLNAVENMFLGRELKNGLGLLERGKMRRAAA 123

Query: 128 EVMGRLNPNFQRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVGE 187
            +  RL         P++ LS  Q+Q V I +A+  +ARILI+DEPTA L P E   +  
Sbjct: 124 AIFQRLGVTID-LSVPIRELSVAQQQFVEIGKALSLEARILILDEPTATLTPAEAEHLFA 182

Query: 188 LIKQLKREGIGIFLISHDIHDVFDLADRVSVMKNGQVVGHARTEDVTKDEVLGMIIMGKV 247
           ++++LK++G+ +  ISH + ++F++ DR++V+++GQ VG           ++ M++  ++
Sbjct: 183 IMRELKQQGVAMIFISHHLEEIFEVCDRITVLRDGQYVGMTEVAQSNVGHLVEMMVGRRI 242

Query: 248 ----PPK 250
               PPK
Sbjct: 243 ENSFPPK 249



 Score = 83.6 bits (205), Expect = 8e-21
 Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)

Query: 28  SVDLYPGEVVALLGHNGAGKSTLIKILSGAYKRDAGEILINGEPAEINNPRDAKKYGI-- 85
           S  L  GE++   G  G+G++     + GA      EI ING  A++++P DA + G+  
Sbjct: 275 SFTLREGEILGFAGLVGSGRTETALAVIGADPAYVKEIRINGTAAKLSDPADALRAGVGI 334

Query: 86  -------ETIYQTLAVADNVDAAANLYLGRELRTPWGTLDDVAMEAKAR-EVMGRLNPNF 137
                  E +    ++  N+ +  NL   R LR       D   EA+A  ++M R+    
Sbjct: 335 LPESRKTEGLITDFSIKQNI-SINNLGKYRSLRF----FIDQRSEARATADIMKRVGVKA 389

Query: 138 QRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVGELIKQLKREGI 197
                 V  LSGG +Q V IAR +     ILI DEPT  +     A++  L+++L   G 
Sbjct: 390 PTMHTEVATLSGGNQQKVVIARWLNHHTNILIFDEPTRGIDVGAKAEIYLLMRELTARGY 449

Query: 198 GIFLISHDIHDVFDLADRVSVMKNGQVVGHARTEDVTKDEVL 239
            I +IS ++ ++  + DRV+V + G++      + +  + V+
Sbjct: 450 SIIMISSELPEIVGMCDRVAVFRQGRIEAMLEGDAIDSNAVM 491