Pairwise Alignments

Query, 345 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

Subject, 318 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 76.6 bits (187), Expect = 8e-19
 Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 18/248 (7%)

Query: 9   AGAAIIASMHSAAIAKDLVIGVSWSNFQEERWKTDEAAIKA-ALEASGDKYISADA---Q 64
           A AA+  S   A  A+   + +   +   E + T E   KA   E S D  + ++    +
Sbjct: 18  ASAALPLSSAFAQTAEKPKVALVMKSLANEFFLTMEDGAKAYQKEHSADFDLISNGIKDE 77

Query: 65  SSAAKQLTDIESLIAQGANALIVLAQDSDAIGPAIEKAAAEGIPVVGYDRLIE------- 117
           +  A Q+  +E +I    +ALI+   DS A+ P I+KA   GI V+  D  ++       
Sbjct: 78  TDTANQIRIVEQMIVSKVDALIIAPADSKAMVPVIKKAVDAGITVINIDNQLDPAVVKSK 137

Query: 118 NPDAFYITFDNKEVGRLQAREVFKQKPEGNFV-FIKGSSADPNADFLFSGQLEVLKEAID 176
           N +  ++  DN++  RL    + KQ   G+ V  I+G S   NA    +G     K+A++
Sbjct: 138 NINVPFVGPDNRKGARLVGEYLAKQLKAGDEVGIIEGVSTTTNAQARTAG----FKDAME 193

Query: 177 AGKIKNVGEAYTDGWKPENAQKNMEQFLTANDNKVDAVVASNDGTAGGAIAALDAQGLAG 236
           A ++K V     D W+     +     L+   N + A++A ND  A GA++A+ A G AG
Sbjct: 194 AAQVKVVSLQSGD-WEINKGNQVAASMLSEYPN-IKALLAGNDSMAVGAVSAVRAAGKAG 251

Query: 237 SVPVSGQD 244
            V V G D
Sbjct: 252 KVQVVGYD 259