Pairwise Alignments

Query, 345 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

Subject, 317 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 79/253 (31%), Positives = 117/253 (46%), Gaps = 7/253 (2%)

Query: 62  DAQSSAAKQLTDIESLIAQGANALIVLAQDSDAIGPAIEKAAAEGIPVVGYDRLIENPD- 120
           DAQSS+ KQ +D+E+ + QG +A++V   D  A+ PA+ +  +E +P+V  DR +E  D 
Sbjct: 66  DAQSSSTKQSSDVENALTQGVDAMVVAPNDVTALAPALNEVLSEKVPLVTVDRRVEGTDT 125

Query: 121 -AFYITFDNKEVGRLQAREVFKQKPEG-NFVFIKGSSADPNADFLFSGQLEVLKEAIDAG 178
              Y+T D+   GRL A  V      G    FI G+     A     G  E LK     G
Sbjct: 126 PVPYVTADSVAGGRLMAELVTSNMKNGARVAFIGGTPGSSTAIDRAKGVHEGLKAG--GG 183

Query: 179 KIKNVGEAYTDGWKPENAQKNMEQFLTA-NDNKVDAVVASNDGTAGGAIAALDAQGLAGS 237
           K + V E  +  W+   A    E  LT+ + N  DA++ ++   A GA  A+ A GL G 
Sbjct: 184 KFQLVAE-QSGEWERAKAMSVAENILTSLSANPPDAIICASGDMALGAAEAVRATGLKGK 242

Query: 238 VPVSGQDADKAALNRVALGTQTVSVWKDSRELGKKAAEIAVALAGGKTMDEVEGVQTFNG 297
           V V G DA    L  +  G     V +   +  + A  +AV    G+   E   VQ F  
Sbjct: 243 VKVIGFDAYPEVLRAIRDGDIAGIVEQSPSKQIRTALRMAVKKVRGEGELETVIVQPFMI 302

Query: 298 GPKGVAMKSVFLA 310
            P+ ++    + A
Sbjct: 303 TPENLSQAEQYSA 315