Pairwise Alignments

Query, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 1304 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N1B4

 Score =  176 bits (447), Expect = 9e-48
 Identities = 124/385 (32%), Positives = 193/385 (50%), Gaps = 21/385 (5%)

Query: 850  EEMRAQEALRERERFLWQLVETLPAMIDCAAPNGEPVYRSQQLRDFLGYELEELDGGAKS 909
            E  R    + ERE  + +LV+     I     +G+ V  +      LGYE E+L  G   
Sbjct: 925  ENARLYREVAEREGKIRRLVDANIIGILVWNADGDIVEANDAFLRMLGYEREDLVSGCLR 984

Query: 910  RLDATLDAGVHPDDLAGVKEQY-ARSLESGEPYRRKHRLRRFDGEYRWIETRAAPMRDEK 968
              D T        +   V E + A+++ +G     +    R DG    +    A      
Sbjct: 985  WRDLTTP------EFREVSEHFLAQAVRTGYAQPHEKEYFRKDGSRLPVIVGLAMFEASS 1038

Query: 969  GAIVQWNVICLDVDREVRMQEELRLAQER-------LARAGQAASLAELSASIAHEVNQP 1021
               V +    LD+    + +E++R ++ R       LA A + A++ +L ASIAHEVNQP
Sbjct: 1039 KEGVAF---VLDLTERKQAEEKIRESERRYREVQTELAHANRVAAMGQLVASIAHEVNQP 1095

Query: 1022 LAAIVANSHACYRWLSADPVNIERAKITTERVIRDAKSAADVVSRIRALFKQSVENRGIL 1081
            +AA + N++A  RWL++ P  I+        +I DA  AADV+ RIR   +++   +G +
Sbjct: 1096 IAAAILNANAALRWLNSQPPEIDEVHKVLGSLIMDANRAADVLGRIRRHIRKAPPQKGAV 1155

Query: 1082 VLSDVISEACSLVAAEALRRRIRLNIDVETNLAPVTVDRIQVQQVLVNLIRNGMEAMDAV 1141
             ++  I E       + ++    +   ++  L  +  DR+++QQVL+NLI N +EAM+ V
Sbjct: 1156 DINAAIREMIEFTRGQIMKSGTLIRTQLKDGLPFIEGDRVELQQVLLNLIMNALEAMNGV 1215

Query: 1142 DDNKTVDVRMHQVDDE--VRIEIGDNGNGVAF--PERIFEPFFTTKENGMGMGLAISRSI 1197
             + +        ++D   V + + D+G G A    E+IF  F+TTK  G+GMGL+I RSI
Sbjct: 1216 SEGERQLHISALLNDAGCVLVSVSDSGPGFASENTEQIFASFYTTKPTGLGMGLSICRSI 1275

Query: 1198 VEAHGGRLWAEKNEPRGARFVFTLP 1222
            +EAHGG LWA  N PRGA   FTLP
Sbjct: 1276 IEAHGGHLWASVNRPRGATVQFTLP 1300



 Score = 38.9 bits (89), Expect = 3e-06
 Identities = 19/55 (34%), Positives = 32/55 (58%)

Query: 553  ETRVARMDGSVMDVVFAIAQPGAIADKSLVGFIDITERKRAEEALRAREREFSQL 607
            E    R DGS + V+  +A   A + + +   +D+TERK+AEE +R  ER + ++
Sbjct: 1014 EKEYFRKDGSRLPVIVGLAMFEASSKEGVAFVLDLTERKQAEEKIRESERRYREV 1068



 Score = 27.7 bits (60), Expect = 0.007
 Identities = 10/26 (38%), Positives = 19/26 (73%)

Query: 426  AISIDIDDEVRMQEALKQSERRYREL 451
            A  +D+ +  + +E +++SERRYRE+
Sbjct: 1043 AFVLDLTERKQAEEKIRESERRYREV 1068