Pairwise Alignments

Query, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 662 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  167 bits (422), Expect = 4e-45
 Identities = 110/379 (29%), Positives = 185/379 (48%), Gaps = 10/379 (2%)

Query: 848  IEEEMRAQEALRERERFLWQLVETLPAMIDCAAPNGEPVYRSQQLRDFLGYELEELDGGA 907
            I++ + A++ALR+   F   + +++   +     +G   Y +       GY  +EL G +
Sbjct: 286  IKKRLAAEQALRDEHAFRQAMEDSMIIGMRARDMDGRITYVNPAFCRMSGYRADELVGHS 345

Query: 908  KSRLDATLDAGVHPDDLAGVKEQYARSLESGEPYRR-KHRLRRFDGEYRWIETRAAPMRD 966
                        +PD L   +EQ A  L    P    +  +R  DG        A P+ D
Sbjct: 346  PPL------PYWNPDSLDTHEEQNALVLTGHAPNEGFEASIRHRDGHIVHTMVYATPLID 399

Query: 967  EKGAIVQWNVICLDVDREVRMQEELRLAQERLARAGQAASLAELSASIAHEVNQPLAAIV 1026
              G    W    +D+    + Q   R  QE+L +  +  ++ E+++++AHE+NQPL+AI 
Sbjct: 400  AHGKQTGWISSVVDISERKKAQALQRQQQEKLEQTARLVTMGEMASTLAHELNQPLSAIA 459

Query: 1027 ANSHACYRWLSADPVNIERAKITTERVIRDAKSAADVVSRIRALFKQSVENRGILVLSDV 1086
            + +  C   L A     E       ++   A+ A  ++ R+    ++    R I  L +V
Sbjct: 460  SYTTGCLNRLEAGDYTREEISGALNKLALQAQRAGRIIRRVHDFVRRREPQRVICHLEEV 519

Query: 1087 ISEACSLVAAEALRRRIRLNIDVETNLAPVTVDRIQVQQVLVNLIRNGMEAMDAV-DDNK 1145
            I ++ + +   A ++++ +   V  +L  +  D + + QVL+NL+RNG++AM A   + +
Sbjct: 520  IEDSIAFIEPLARKQQVHMLRLVPAHLPKLLADPVLLGQVLINLMRNGIDAMAATPPERR 579

Query: 1146 TVDVRMHQVDDEVRIEIGDNGNGV--AFPERIFEPFFTTKENGMGMGLAISRSIVEAHGG 1203
             + V    + D+V + I D G G+     E++F PFFTTK  GMGMGL I RS++E HGG
Sbjct: 580  QLIVEAQLLGDQVEVCIADRGCGIPPEVAEKLFSPFFTTKTEGMGMGLNICRSVIEFHGG 639

Query: 1204 RLWAEKNEPRGARFVFTLP 1222
            RLW E     G  F+FTLP
Sbjct: 640  RLWFEPGAEGGTVFIFTLP 658



 Score = 34.3 bits (77), Expect = 4e-05
 Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 6/144 (4%)

Query: 727 EEALRNSKQQLEQMIEAVPFSTLSFAPTGELTYVSKRYQDQAGAPGAEIKDFDALAREVA 786
           E+ALR+     + M +++     +    G +TYV+  +   +G    E+           
Sbjct: 293 EQALRDEHAFRQAMEDSMIIGMRARDMDGRITYVNPAFCRMSGYRADELVGHSP-PLPYW 351

Query: 787 HPDDFPT---MFARATQGFATGQPFVNRFRRRLKDGNYRWIEARAQPLRRADGPIVQWYF 843
           +PD   T     A    G A  + F    R R  DG+       A PL  A G    W  
Sbjct: 352 NPDSLDTHEEQNALVLTGHAPNEGFEASIRHR--DGHIVHTMVYATPLIDAHGKQTGWIS 409

Query: 844 ASIDIEEEMRAQEALRERERFLWQ 867
           + +DI E  +AQ   R+++  L Q
Sbjct: 410 SVVDISERKKAQALQRQQQEKLEQ 433