Pairwise Alignments
Query, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 901 a.a., PAS domain S-box from Dechlorosoma suillum PS
Score = 202 bits (515), Expect = 8e-56
Identities = 170/580 (29%), Positives = 265/580 (45%), Gaps = 39/580 (6%)
Query: 658 VHPDDKTRMSNALFHSVATGERFSMKYRLRRADGVYRWVEGSAEPMRDEEGRILQWYGLS 717
VHPDD + + L H +A G + R A+G +W+ S P+ +E+ Y ++
Sbjct: 343 VHPDDMALVVDMLRH-LAEGAAQEFECRFHSANGQDKWLLWSINPVPEEK----LLYAVA 397
Query: 718 HDIDDIMHVEEALRNSKQQLEQMIEAVPFSTLSFAPTGELTYVSKRYQDQAGAPGAEI-- 775
HDI D E+AL + + M E+V + G + YV+ + G AE+
Sbjct: 398 HDITDRKTAEQALTDEYAFRKAMEESVSTGLRAIDMEGRIIYVNPAFCRMLGWSEAELLG 457
Query: 776 --KDFDALAREVAHPDDFPTMFARATQGFATGQPFVNRFRRRLKDGNYRWIEARAQPLRR 833
F E H T G A + F R R K+G + PL
Sbjct: 458 LKPPFPYWPPE--HARQLATNIELTLAGQAPAKGFEQRVMR--KNGERMDVRFYISPLID 513
Query: 834 ADGPIVQWYFASIDIEEEMRAQ-EALRERERFLWQLVETLPAMIDCAAPNGEPVYRSQQL 892
A+G W A DI E R + E R +ERF+ L A+ A + E ++ ++
Sbjct: 514 ANGKQTGWMGAMTDITEPKRVRGELERSQERFMAVLDGLDSAVYVADAKSDEILFGNRAF 573
Query: 893 RDFLGYELEELDGGAKSRLDATLDAGVHPDDLAGVKEQYARSLESGEPYRRKHRLRRFDG 952
+ G++ A R + P G + R L S E R + FDG
Sbjct: 574 KSIFGFD-------AVGRNCWEVTEACRPP--VGAFDCDLRLL-SPEVLPR----QLFDG 619
Query: 953 EY------RWIETRAAPMRDEKGAIVQWNVICLDVDREVRMQEELRLAQERLARAGQAAS 1006
E RW +R G +V+ I D+ +++E Q+RL + + +
Sbjct: 620 EVQNSLSGRWYHLHDRAIRWVDGRVVRVQ-IGTDITERKQIEEVNLQQQKRLEQTSRLIT 678
Query: 1007 LAELSASIAHEVNQPLAAIVANSHACYRWLSADPVNIERAKITTERVIRDAKSAADVVSR 1066
+ E+++S+AHE+NQPLAAI C + + E E+ A+ A ++ R
Sbjct: 679 MGEMASSLAHELNQPLAAIANYCMGCVKRMKGGAAKPEELLGAMEKASFQAERAGKIIRR 738
Query: 1067 IRALFKQSVENRGILVLSDVISEACSLVAAEALRRRIRLNIDVETNLAPVTVDRIQVQQV 1126
+R K++ NRG ++L D++ EA EA + + + +D+ L P+ DRI ++QV
Sbjct: 739 MREFVKKNEPNRGQVLLGDIVEEALGFAEIEARKLGVNICVDLPPELPPLFADRIMIEQV 798
Query: 1127 LVNLIRNGMEAM-DAVDDNKTVDVRMHQVDD-EVRIEIGDNGNGV--AFPERIFEPFFTT 1182
L+NL++NG+EAM D + + + V D+ + + + D G+G+ E +F PF+TT
Sbjct: 799 LLNLVKNGIEAMRDTLPAERRLTVSATLPDNHSLEVAVADRGHGLGSTTAEELFAPFYTT 858
Query: 1183 KENGMGMGLAISRSIVEAHGGRLWAEKNEPRGARFVFTLP 1222
K GMGMGL I RSI+E H GRLWA+ N G F FTLP
Sbjct: 859 KPEGMGMGLPICRSIIEYHKGRLWADANPGGGTVFRFTLP 898
Score = 48.1 bits (113), Expect = 3e-09
Identities = 104/489 (21%), Positives = 175/489 (35%), Gaps = 80/489 (16%)
Query: 285 LIVAAISRQYQLALSNLQQSVATLRERERELSQIVNMVPVHIRRLTPEGEPTFFNKRLTD 344
L++ A++ +L+ L++ V + E+E ++ ++ T EG+ N
Sbjct: 266 LVIGALTLALIWSLALLRRDVQRRLQAEKERDRLFSLSLGLQCIATLEGKLRRVNPAFER 325
Query: 345 FFGLDLQQLEKPNASRLVTAVQTLVHPDDADSLLQAVRRSLATGEPYSIKYRMRRADGAY 404
G L +L ++ VHPDD +L+ + R LA G + R A+G
Sbjct: 326 VLGYPLGELRD-------RSLLDFVHPDDM-ALVVDMLRHLAEGAAQEFECRFHSANGQD 377
Query: 405 RWVDGRAEPLRDDSGTILQWFAISIDIDDEVRMQEALKQSERRYRELFHYMPIGLAQID- 463
+W+ P+ ++ +A++ DI D ++AL + + + GL ID
Sbjct: 378 KWLLWSINPVPEEK----LLYAVAHDITDRKTAEQALTDEYAFRKAMEESVSTGLRAIDM 433
Query: 464 AGKLI---PMFKEMRAQGVVSLETYMDENPEFLSHALEALEVEEVNQHVIDMFRANSREE 520
G++I P F M L + P F
Sbjct: 434 EGRIIYVNPAFCRMLGWSEAEL---LGLKPPF---------------------------- 462
Query: 521 MGGSITRYWQPALA-TIRRSIEARYRGEEVFQE-ETRVARMDGSVMDVVFAIAQPGAIAD 578
YW P A + +IE G+ + E RV R +G MDV F I+ P A+
Sbjct: 463 ------PYWPPEHARQLATNIELTLAGQAPAKGFEQRVMRKNGERMDVRFYIS-PLIDAN 515
Query: 579 KSLVGFI----DITERKRAEEALRAREREFSQLVNMVPS--YLWRLTPDGVPNFLNQRLI 632
G++ DITE KR L + F +++ + S Y+ D + F N+
Sbjct: 516 GKQTGWMGAMTDITEPKRVRGELERSQERFMAVLDGLDSAVYVADAKSDEI-LFGNRAFK 574
Query: 633 DFLGPDVVNAN----VEGVHPLAAIIGAVVHPDDKTRMSNALFHSVATGERFSMKYRLRR 688
G D V N E P + + LF Y L
Sbjct: 575 SIFGFDAVGRNCWEVTEACRPPVGAFDCDLRLLSPEVLPRQLFDGEVQNSLSGRWYHLH- 633
Query: 689 ADGVYRWVEGSAEPMRDEEGRILQWYGLSHDIDDIMHVEEALRNSKQQLEQMIEAVPFST 748
D RWV+G ++ + DI + +EE +++LEQ +
Sbjct: 634 -DRAIRWVDGRVVRVQ-----------IGTDITERKQIEEVNLQQQKRLEQTSRLITMGE 681
Query: 749 LSFAPTGEL 757
++ + EL
Sbjct: 682 MASSLAHEL 690