Pairwise Alignments
Query, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 1513 a.a., sensor/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Score = 117 bits (294), Expect = 6e-30
Identities = 155/666 (23%), Positives = 262/666 (39%), Gaps = 74/666 (11%)
Query: 589 ERKRAEEALRAREREFSQLVNMVPSYLWRLTPDGVPNFLNQRL--IDFLGPDVVNANVEG 646
E +R + LR +++QL + +P + L N + I L P V
Sbjct: 731 EFERKNDQLRILGEDYAQLFDTIPIAIASLDESLRVRRFNAGMSAIFHLQPHDVG----- 785
Query: 647 VHPLAAIIGAVVHPDDKTRMSNALFHSVATG--ERFSMKYRLRRADGVYRWVEGSAEPMR 704
PL I + PD+ LF S+A G E + R DG RW + +R
Sbjct: 786 -RPLQQIASCLAEPDN-------LFKSLALGLSEGGTHDSEARLTDG--RWCQQRIHAVR 835
Query: 705 DEEGRILQWYGLSHDIDDIMHVEEALRNSKQQLEQMIEAVPFSTLSFAPTGE----LTYV 760
DE G DI + H E A+R + L+++ VP + + YV
Sbjct: 836 DETGATEHMLLTFMDITHVKHAE-AMRQEARSLDEVSRNVPGVVFKLCAPHDGNIRVEYV 894
Query: 761 SKRYQDQAGAPGAEIKDFDALAREVAHPDDFPTMFARATQGFATGQPFVNRFRRRLKDGN 820
+ G EIK + PD P + A + G P G
Sbjct: 895 GGGTVELCGLSQEEIKADPHALVALFGPDVVPHILAGISATDGEGTPVDVEIPLHCTGGT 954
Query: 821 YRWIEARAQPLRRADGPIVQWYFASIDIEEEMRAQEALRER---ERFLWQLVETLPAMID 877
+W+ +A A G +WY ++D E R +A R +R+L ++++ P +I
Sbjct: 955 -KWVHVQATSTP-ARGGGTEWYGVAVDATE--RRYDATRMHNAADRYL-RILDHAPMLIW 1009
Query: 878 CAAPNGEPVYRSQQLRDFLGYELEELDGGAKSRLDATLDAGVHPDDLAGVKEQYARSLES 937
+ G + + DF G +E+ G + GVHPDD Y ++
Sbjct: 1010 RSDTTGACDWFNTTWLDFTGRTMEQEYGYGWA-------GGVHPDDYDRCVSIYQKAFAL 1062
Query: 938 GEPYRRKHRLRRFDGEYRWIETRAAPMRDEKGAIVQWNVICLDVDREVRMQEELRLAQER 997
+ + +RL+R DG++RW+ P+ D G + C D+ V E + A +R
Sbjct: 1063 QQAFEMNYRLKRHDGQFRWLVDCGKPLPDLDGTFSGFIGYCYDITDAVNALESMCEASKR 1122
Query: 998 LARAGQAASLAELSASIAHEVNQPLAAIVANSHACYRWLSADPVNIERAKITTERVIRDA 1057
A + S E A+++HE+ PL + + L ++ E+ + T +
Sbjct: 1123 AEEANRTKS--EFLANVSHELRTPLNGAL----GMLQLLELSSLSPEQRQYVTTAI---- 1172
Query: 1058 KSAADVVSRIRALFKQSVENRGILVLS-------DVISEACSLVAAEALRRRIRLNIDVE 1110
+S ++V + + S G LV+ +++ E S + +A + I L E
Sbjct: 1173 RSGQNLVRLLSDILDLSRIEAGKLVIEAIPCDIRELVDEVFSTFSLDATGKGITL----E 1228
Query: 1111 TNLAP-----VTVDRIQVQQVLVNLIRNGMEAMDAVDDNKTVDVRMHQVDDEVRI-EIGD 1164
T +AP V D ++++Q L NL+ N ++ + + D V + D
Sbjct: 1229 TTIAPGTPTYVRTDPLRLRQTLFNLVGNAVKFTEKGGVRVEFSTASMRGDAIVLFCTVRD 1288
Query: 1165 NGNGVAFP--ERIFEPF------FTTKENGMGMGLAISRSIVEAHGGRLWAEKNEPRGAR 1216
G G+ E IF+PF +T + +G+G+GL I ++E GG + E G
Sbjct: 1289 TGPGIPEDRIESIFQPFTQLDGSYTRRHSGLGLGLGIVCRLMELFGGSIEVESAPDMGTA 1348
Query: 1217 FVFTLP 1222
F +P
Sbjct: 1349 MHFAIP 1354
Score = 84.0 bits (206), Expect = 9e-20
Identities = 96/433 (22%), Positives = 167/433 (38%), Gaps = 47/433 (10%)
Query: 308 LRERERELSQIVNMVPVHIRRLTPEGEPTFFNKRLTDFFGLDLQQLEKPNASRLVTAVQT 367
LR + +Q+ + +P+ I L FN ++ F L + +P L
Sbjct: 739 LRILGEDYAQLFDTIPIAIASLDESLRVRRFNAGMSAIFHLQPHDVGRP----LQQIASC 794
Query: 368 LVHPDDADSLLQAVRRSLATGEPYSIKYRMRRADGAYRWVDGRAEPLRDDSGTILQWFAI 427
L PD+ L +++ L+ G + + R+ DG RW R +RD++G
Sbjct: 795 LAEPDN---LFKSLALGLSEGGTHDSEARL--TDG--RWCQQRIHAVRDETGATEHMLLT 847
Query: 428 SIDIDDEVRMQEALKQSERRYRELFHYMPIGLAQIDAGKLIPMFKEMRAQGVVSLETYMD 487
+DI V+ EA++Q R E+ +P + ++ A + E G V L
Sbjct: 848 FMDIT-HVKHAEAMRQEARSLDEVSRNVPGVVFKLCAPHDGNIRVEYVGGGTVELCGLSQ 906
Query: 488 ENPEFLSHALEALEVEEVNQHVIDMFRANSREEMGGSITRYWQPALATIRRSIEARYRGE 547
E + HAL AL +V H++ A E +
Sbjct: 907 EEIKADPHALVALFGPDVVPHILAGISATDGEGTPVDV---------------------- 944
Query: 548 EVFQEETRVARMDGSVMDVVFAIAQPGAIADKSLVGF-IDITERKRAEEALRAREREFSQ 606
E + G+ V A + P G +D TER+ + + +
Sbjct: 945 -----EIPLHCTGGTKWVHVQATSTPARGGGTEWYGVAVDATERRYDATRMHNAADRYLR 999
Query: 607 LVNMVPSYLWRLTPDGVPNFLNQRLIDFLGPDVVNANVEGVHPLAAIIGAVVHPDDKTRM 666
+++ P +WR G ++ N +DF G + G VHPDD R
Sbjct: 1000 ILDHAPMLIWRSDTTGACDWFNTTWLDFTGRTMEQEYGYGW-------AGGVHPDDYDRC 1052
Query: 667 SNALFHSVATGERFSMKYRLRRADGVYRWVEGSAEPMRDEEGRILQWYGLSHDIDDIMHV 726
+ + A + F M YRL+R DG +RW+ +P+ D +G + G +DI D ++
Sbjct: 1053 VSIYQKAFALQQAFEMNYRLKRHDGQFRWLVDCGKPLPDLDGTFSGFIGYCYDITDAVNA 1112
Query: 727 EEALRNSKQQLEQ 739
E++ + ++ E+
Sbjct: 1113 LESMCEASKRAEE 1125
Score = 61.6 bits (148), Expect = 5e-13
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 317 QIVNMVPVHIRRLTPEGEPTFFNKRLTDFFGLDLQQLEKPNASRLVTAVQTLVHPDDADS 376
+I++ P+ I R G +FN DF G ++Q VHPDD D
Sbjct: 999 RILDHAPMLIWRSDTTGACDWFNTTWLDFTGRTMEQ-------EYGYGWAGGVHPDDYDR 1051
Query: 377 LLQAVRRSLATGEPYSIKYRMRRADGAYRWVDGRAEPLRDDSGTILQWFAISIDIDDEVR 436
+ +++ A + + + YR++R DG +RW+ +PL D GT + DI D V
Sbjct: 1052 CVSIYQKAFALQQAFEMNYRLKRHDGQFRWLVDCGKPLPDLDGTFSGFIGYCYDITDAVN 1111
Query: 437 MQEALKQSERRYRELFHYMPIGLAQIDAGKLIPMFKEMRAQGVVSLETYMDENPEFLSHA 496
E++ ++ +R E LA + P+ + ++ L + E ++++ A
Sbjct: 1112 ALESMCEASKRAEEANRTKSEFLANVSHELRTPLNGALGMLQLLELSSLSPEQRQYVTTA 1171
Query: 497 LEA 499
+ +
Sbjct: 1172 IRS 1174