Pairwise Alignments
Query, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 811 a.a., Signal transduction histidine kinase from Paraburkholderia bryophila 376MFSha3.1
Score = 112 bits (281), Expect = 1e-28
Identities = 125/470 (26%), Positives = 200/470 (42%), Gaps = 49/470 (10%)
Query: 784 EVAHPDDFPTMFARATQGFATGQPFVNRFRR-RLKDGNYRWIEARAQPLRRADGPIVQWY 842
E+ HPDD + T P+ R YR + RA G I +W
Sbjct: 222 EMIHPDDRLVAQTALNRSLETDGPYRADVRLWHAASSTYRRCQIRAAGSHDESGAIYEWV 281
Query: 843 FASIDIEEEM-RAQEALRERERFLWQLVETLPAMIDCAAPNGEPVYRSQQLRDFLGYELE 901
D+EE + AQ ERER + C P ++ + F
Sbjct: 282 GMITDVEETLINAQSLTEERERLDLSIQAAEIGTFHCPIPLDRIIWNVKCKEHFW----- 336
Query: 902 ELDGGAKSRLDATLDAGVHPDDLAGVKEQYARSLESGEPYRRKHRLRRFDGEYRWIETRA 961
L A+ D A +HPDD ++ +++ G PY ++R G+ RWI +
Sbjct: 337 -LPANAEVGFDLFY-ARIHPDDRQKTRDAVEKAVNEGVPYDIEYRTASPSGDIRWIRAKG 394
Query: 962 APMRDEKGAIVQWNVICLDVD--REVRMQEELRLAQERLAR--AGQAASLAE-LSASIAH 1016
DE G ++++ I +DV + + M+ + L ERL R A A L + A+++H
Sbjct: 395 RTHVDEAGRPLRFDGITIDVSSHKALEMERDRLLTNERLLRLEAQHANQLKDAFLATVSH 454
Query: 1017 EVNQPLAAIVANSHACYRWL------SADPVNIERAKITTERVIRDAKSAAD---VVSRI 1067
E+ PL +A WL + DP I R +R + D +SRI
Sbjct: 455 ELRTPL-------NAMQSWLYLLQHENTDPELIARGIEAIDRNVELQTRLVDDLLDLSRI 507
Query: 1068 RA--LFKQSVENRGILVLSDVISEACSLVAAEALRRRIRLNIDVETNLAPVTVDRIQVQQ 1125
A LF S E + +L IS+ A+ + RL +T L V D ++++Q
Sbjct: 508 AAGKLFINSSEVDLVPLLVAEISDVKLAARAKGVEIVPRL---ADTLL--VEGDPLRLRQ 562
Query: 1126 VLVNLIRNGMEAMDAVDDNKTVDVRMHQVDDEVRIEIGDNGNGV--AFPERIFEPF---- 1179
V N++ N ++ A + + + + I + DNG G+ +F +FEPF
Sbjct: 563 VFSNVLSNALKYSKA---EGKIGIVASRAGNWAEIRVEDNGAGIPASFINHVFEPFAQAS 619
Query: 1180 --FTTKENGMGMGLAISRSIVEAHGGRLWA-EKNEPRGARFVFTLPNVAK 1226
T + G+G+GLAI++SIV HGG + A + + RG+ FV +P +A+
Sbjct: 620 QATTRRFGGLGIGLAIAKSIVTLHGGSITAHSEGDGRGSTFVVHIPLLAE 669
Score = 61.2 bits (147), Expect = 3e-13
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 3/206 (1%)
Query: 657 VVHPDDKTRMSNALFHSVATGERFSMKYRL-RRADGVYRWVEGSAEPMRDEEGRILQWYG 715
++HPDD+ AL S+ T + RL A YR + A DE G I +W G
Sbjct: 223 MIHPDDRLVAQTALNRSLETDGPYRADVRLWHAASSTYRRCQIRAAGSHDESGAIYEWVG 282
Query: 716 LSHDIDDIMHVEEALRNSKQQLEQMIEAVPFSTLSFAPTGELTYVSKRYQDQAGAPGAEI 775
+ D+++ + ++L +++L+ I+A T + + + ++ P
Sbjct: 283 MITDVEETLINAQSLTEERERLDLSIQAAEIGTFHCPIPLDRIIWNVKCKEHFWLPANAE 342
Query: 776 KDFDALAREVAHPDDFPTMFARATQGFATGQPFVNRFRRRLKDGNYRWIEARAQPLRRAD 835
FD + HPDD + G P+ +R G+ RWI A+ +
Sbjct: 343 VGFDLFYARI-HPDDRQKTRDAVEKAVNEGVPYDIEYRTASPSGDIRWIRAKGRTHVDEA 401
Query: 836 GPIVQWYFASIDIEEEMRAQEALRER 861
G +++ +ID+ +A E R+R
Sbjct: 402 GRPLRFDGITIDVSSH-KALEMERDR 426
Score = 51.6 bits (122), Expect = 3e-10
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 14/142 (9%)
Query: 369 VHPDDADSLLQAVRRSLATGEPYSIKYRMRRADGAYRWVDGRAEPLRDDSGTILQWFAIS 428
+HPDD AV +++ G PY I+YR G RW+ + D++G L++ I+
Sbjct: 352 IHPDDRQKTRDAVEKAVNEGVPYDIEYRTASPSGDIRWIRAKGRTHVDEAGRPLRFDGIT 411
Query: 429 IDIDDEVRMQ---EALKQSERRYR-ELFHYMPIGLAQIDAGKLIPMFKEMRA-----QGV 479
ID+ ++ + L +ER R E H Q+ L + E+R Q
Sbjct: 412 IDVSSHKALEMERDRLLTNERLLRLEAQH-----ANQLKDAFLATVSHELRTPLNAMQSW 466
Query: 480 VSLETYMDENPEFLSHALEALE 501
+ L + + +PE ++ +EA++
Sbjct: 467 LYLLQHENTDPELIARGIEAID 488
Score = 45.8 bits (107), Expect = 1e-08
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 368 LVHPDDADSLLQAVRRSLATGEPYSIKYRM-RRADGAYRWVDGRAEPLRDDSGTILQWFA 426
++HPDD A+ RSL T PY R+ A YR RA D+SG I +W
Sbjct: 223 MIHPDDRLVAQTALNRSLETDGPYRADVRLWHAASSTYRRCQIRAAGSHDESGAIYEWVG 282
Query: 427 ISIDIDDEVRMQEALKQSERR 447
+ D+++ + ++L + R
Sbjct: 283 MITDVEETLINAQSLTEERER 303
Score = 45.8 bits (107), Expect = 1e-08
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 656 AVVHPDDKTRMSNALFHSVATGERFSMKYRLRRADGVYRWVEGSAEPMRDEEGRILQWYG 715
A +HPDD+ + +A+ +V G + ++YR G RW+ DE GR L++ G
Sbjct: 350 ARIHPDDRQKTRDAVEKAVNEGVPYDIEYRTASPSGDIRWIRAKGRTHVDEAGRPLRFDG 409
Query: 716 LSHDI----------DDIMHVEEALRNSKQQLEQMIEA 743
++ D+ D ++ E LR Q Q+ +A
Sbjct: 410 ITIDVSSHKALEMERDRLLTNERLLRLEAQHANQLKDA 447