Pairwise Alignments

Query, 343 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score = 58.5 bits (140), Expect = 4e-13
 Identities = 51/236 (21%), Positives = 111/236 (47%), Gaps = 22/236 (9%)

Query: 103 REAHLIQDMAIAAIYLGVALSVVGFVFGMP-----VGTLVTTSGVIAVIFGLALQNTLGD 157
           R +HL+QD  ++    G  + V+G + G+      +  ++T  G+  VI G ALQ+TL +
Sbjct: 336 RISHLMQDFFVSMS--GKVVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSN 393

Query: 158 VFSGIALTLGRAYAIGDWIELTDGTEGRVIETNWRSTNLLSATHNVVVLPNSVLAKQGMT 217
             +G+ L + R + +GD++    G +G+V   +  +T + +  + ++++PNS +    + 
Sbjct: 394 FAAGMMLLIYRPFDVGDFVH-AGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIK 452

Query: 218 NLSRPDETHLITLRVRVAATQRPRVVEEIMRSALQSSVLINKSPPPVAALKAIDAIAIE- 276
           N++  +    + +   +  +      E ++   ++S   + K+P P   +  ++  +I+ 
Sbjct: 453 NVTH-ERIRRVDMVFGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDF 511

Query: 277 -VELQFRVDNVAIRTPAKNEIVDLLHDRCEANGLSLAIPAESL--------AFMPP 323
            V    + D+         + V L  DR    G+S+  P + +        AF+PP
Sbjct: 512 IVRPWVKTDDYWDVYWDVTKEVKLRFDR---EGISIPFPQQDVHLHLVDQKAFIPP 564