Pairwise Alignments

Query, 343 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 274 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 4/207 (1%)

Query: 108 IQDMAIAAIYLGVALSVVGFVFGMPVGTLVTTSGVIAVIFGLALQNTLGDVFSGIALTLG 167
           + +MA A +++   ++ +G + G+   +LV   G   +  GLALQ +L +  SG+ + L 
Sbjct: 60  VANMAWALVFVFTVIATLGQI-GVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLF 118

Query: 168 RAYAIGDWIELTDGTEGRVIETNWRSTNLLSATHNVVVLPNSVLAKQGMTNLSRPDETHL 227
           R   +GD+IE   G  G V E    ST L +  + V+V PNS +    +TN S   ET  
Sbjct: 119 RPCRVGDYIEAA-GIAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSAM-ETRR 176

Query: 228 ITLRVRVAATQRPRVVEEIMRSALQSSVLINKSPPPVAALKAIDAIAIEVELQFRVDNVA 287
           I L + V+     +  +E+++  L ++  I K P    AL  +   ++   ++  V   +
Sbjct: 177 IDLVIGVSYDADLKQTKEVLKQVLDNNAYILKDPAYTVALTELADSSVNFVVRPWVKG-S 235

Query: 288 IRTPAKNEIVDLLHDRCEANGLSLAIP 314
              PA+ EI++ +    + N + +  P
Sbjct: 236 DYWPARFEILEQIKLALDENNIGIPYP 262