Pairwise Alignments

Query, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 373 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  112 bits (279), Expect = 2e-29
 Identities = 87/314 (27%), Positives = 148/314 (47%), Gaps = 28/314 (8%)

Query: 22  LAGLAVILVLAGIGYLLFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGA 81
           LA L V+ + A  GY L     +L  ++   A+  L L+++ G+ G  +LGHAA FG GA
Sbjct: 52  LASLPVLRLFAD-GYAL-----SLGIQVCYYAIAALGLNILVGFTGQISLGHAAFFGVGA 105

Query: 82  YAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEFA 141
           +++       G+   + +  AG++  A AGL  G    R  GL   + ++A   +  +  
Sbjct: 106 FSSAWLNTRVGLPVLVCIPLAGLMSAA-AGLLFGAPAARIKGLYLAIATLAAQFIIEDLF 164

Query: 142 NKASSWTGGSDGLAGISPDPLIGLFAFDLWGRTAYVFGVVLLAIVFVLLRLVVRSPFGML 201
            +   +TGGS G   ++  P++G FAFD   R  ++  +    ++FV+   ++RS  G  
Sbjct: 165 VRMDWFTGGSSG--AMADTPMLGSFAFDNDARY-FLLSLSFTIVLFVMAANLMRSRDGRA 221

Query: 202 CRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTLSAES 261
              +R+       MG + T   +  + I+   AG+GGAL       V  ++ +  LS + 
Sbjct: 222 FVALRDHYLSAEVMGIALTRYRVMSFGIAAFYAGIGGALYGHYLMFVSAEAFTILLSIQF 281

Query: 262 LVMLVLGGTGSLFGALTGTIVFMFFEDL------------------VSTANPFHWLTMVG 303
           L M+++GG GS+ GA+ GTI  +   ++                  V    PF     +G
Sbjct: 282 LGMIIIGGLGSVMGAMLGTIFMVALPEVMGAVIAALQTTQWGNRPAVINGLPFFREMAIG 341

Query: 304 ALLIAVVLFAPKGL 317
           A +I  ++F P GL
Sbjct: 342 AAIILFLIFEPDGL 355