Pairwise Alignments

Query, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 324 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  150 bits (379), Expect = 4e-41
 Identities = 107/298 (35%), Positives = 151/298 (50%), Gaps = 22/298 (7%)

Query: 40  PNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGAYAAGIAAVHFGITDPLLM 99
           P  + L TR+  +AL  + L+L  G  G+ +LGHA  FG G YA GI A H    DPL+ 
Sbjct: 28  PFTITLATRVAILALAGVGLNLALGLGGMVSLGHALFFGIGGYAMGILAHHAQTFDPLME 87

Query: 100 LAAGILG--------------GALAGLACGVVILRAHGLPQLVLSIALIHLFHEFANKAS 145
               I G               ALA LA G + LR  G+  +++++A   +F+ FA    
Sbjct: 88  APFVIEGTKSMPVIWLTAMALSALAALAVGALSLRTTGVYFIMITLAFGQMFYYFA---I 144

Query: 146 SWT--GGSDGLAGISPDPLIGLFAFDLWGRTAYVFGVVLLAIVFVLLRLVVRSPFGMLCR 203
           SW   GG DGL+    +   GL   D        +G++LLA+ FV  R+   SPFG+   
Sbjct: 145 SWPAYGGEDGLSIYVRNGFPGLNTLDPIQFFLLCYGLLLLAL-FVCARITA-SPFGLALS 202

Query: 204 GIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTLSAESLV 263
             R+ P R   +G SP    L  + ISGA+ G+ GAL A   + V     S+  S E +V
Sbjct: 203 TARQAPARAETLGFSPFRLRLIAFTISGAITGLAGALFADLNRFVSPAMFSWHTSGEIMV 262

Query: 264 MLVLGGTGSLFGALTGTIVFMFFEDLVSTANPFHWLTMVGALLIAVVLFAPKGLYGTV 321
            ++LGG   LFG + G  +F+  E  +   + + WL  +GALL+ VVLFA  GL GT+
Sbjct: 263 FVILGGVARLFGPVAGAALFILLEHWLGGLSEY-WLIYLGALLLGVVLFAKGGLVGTL 319