Pairwise Alignments

Query, 336 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  192 bits (487), Expect = 1e-53
 Identities = 117/301 (38%), Positives = 182/301 (60%), Gaps = 11/301 (3%)

Query: 30  ALALLLIVGAMVNPNFISLNNLANVATRSAFIAIIAVGATFVISAGDLDLSVGSMVAFVA 89
           AL  L++V + +NPNF +++NL N+  +++  AIIAVG T VI    +DLSVGS++A   
Sbjct: 37  ALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLALCG 96

Query: 90  SLMILFMNSGVIADPALMLTAAVLFAVVAGSVCGLANGLITTVGRIEPFIATLGTMGIYR 149
           +     +   V   P L+   AV  A++AG+  G  +G+I   G+++ FIATL TM + R
Sbjct: 97  AFAATLVAMEV---PVLV---AVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLR 150

Query: 150 GLTTWLSQGGAITLREPELQELYRPAYFGS--ILGMPVPIAIILAVTAVAAFILYRTRYG 207
           G+T   + G  I+    +  + +  A+FG+   LG+PVP+ +++ V A A ++L  TR+G
Sbjct: 151 GVTMVYTDGRPISTGFTDTADTF--AWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFG 208

Query: 208 RHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGILWELQ 267
           R+V AVG N    R SGI V+RV+   + I GL  A+A ++   RL S   T G+ +EL 
Sbjct: 209 RYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELD 268

Query: 268 AITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAMQGAIIIIAML 327
           AI AVV+GGT+L GG GR+ GT+ GA I+  + N + L + +S Y     +  +I++A+L
Sbjct: 269 AIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLD-VSSYYQMIAKAVVILLAVL 327

Query: 328 V 328
           V
Sbjct: 328 V 328