Pairwise Alignments

Query, 341 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 328 a.a., ribose ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  204 bits (518), Expect = 3e-57
 Identities = 117/307 (38%), Positives = 179/307 (58%), Gaps = 19/307 (6%)

Query: 29  LVLIGIALVYEVLGWLFVGQSFLMNSQRLTIMILQVSVIGIIAVGVTQVIITGGIDLSSG 88
           L L G+ +V  ++G      +F   S    ++  QVS++GI+AVG++ VI+TGGIDLS G
Sbjct: 31  LPLAGLVVVSLLMG--LASDNFFTLSNWFNVL-RQVSIVGILAVGMSFVILTGGIDLSVG 87

Query: 89  SVVGMTAMISASVAQASTWPRALYPSLTDLPAIVPIGLGVGIGLLAGFINGQLIARTKIP 148
           + + +   ISA +   S            LPA + +  GVG+    G +NG L+A  ++P
Sbjct: 88  AAMALAGTISAGLIVNS-----------GLPAPLALLCGVGLATCIGLLNGALVAWGRMP 136

Query: 149 PFIATLGMMVSARGVSKWYTKGQPVSGLTEQFNFIGTGIW-----PVIVFLVVALIFHIA 203
             I TL  M  ARGV   Y+ G P+SGL    ++ G G       PVI+ L+V  +  + 
Sbjct: 137 AIIVTLATMGVARGVGLIYSGGYPISGLPGWISWFGVGRIGMVPVPVILMLIVYALAWLL 196

Query: 204 LRYTRYGKFTYAIGANVQAARVSGINVEAHLVKVYAIAGMLAGLAGVVTAARAQTAQAGM 263
           L+ T +G+  YAIG N  AAR+SG+      + VYAI+G  +GLA ++   R  + Q   
Sbjct: 197 LQRTAFGRHVYAIGGNEMAARLSGVKTTRIKLAVYAISGFTSGLAAIILTGRLMSGQPNA 256

Query: 264 GVMYELDAIAATVIGGTSLTGGVGRVTGTVIGTVILGVMTSGFTFLRVDAYYQEIVKGII 323
           GV +ELDAIAA V+GGT++ GG G V GT+IG V+LG++ +G   + ++ Y Q+I++G+I
Sbjct: 257 GVGFELDAIAAVVLGGTAIAGGRGLVVGTLIGAVLLGILNNGLNLMGINPYLQDIIRGVI 316

Query: 324 IVAAVVV 330
           I+ A+ +
Sbjct: 317 ILLAIYI 323