Pairwise Alignments
Query, 513 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Subject, 503 a.a., ribose import ATP-binding protein RbsA from Phaeobacter inhibens DSM 17395
Score = 440 bits (1131), Expect = e-128
Identities = 226/483 (46%), Positives = 327/483 (67%), Gaps = 3/483 (0%)
Query: 23 LLTAEGVRKEFPGVVALDDVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYPDQGEVKL 82
+L EG+ K FPGV ALD V + G VHALMGENGAGKSTLMK+L GI+ PD+G++ +
Sbjct: 7 VLRLEGIVKTFPGVRALDGVSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPDEGQIIV 66
Query: 83 RGAGIRLKSPLDALENGIAMIHQELNLMPFMTVAENIWIRREPKNRFGFVDHGEMRRMTA 142
+ + PLDA GI IHQEL+L ++VAENI++ P+ RFG VD E+ T
Sbjct: 67 AEQPVVMSGPLDAKAKGIVFIHQELSLADELSVAENIYLGELPRKRFGLVDWAELEAKTN 126
Query: 143 KLFERLKIDLDPEIEVRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTEREVAHLFEI 202
+ E+LK+ + + V LS+AN+QMVEIA+A++ ++ +I DEPT++LT+ E LFE+
Sbjct: 127 AILEKLKVGFNAKTRVGDLSIANQQMVEIARALTVDAKAVIFDEPTASLTDAEKVVLFEV 186
Query: 203 IRDLRSQGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTRDDIIRMMVGREIT 262
I DL+ QG+GI YI+H+M E+F+I D SV RDG+Y GT + E +++ +MM+GR++
Sbjct: 187 ISDLQEQGVGIAYISHRMEEIFKITDRISVLRDGQYQGTVNTAETNEENVTQMMIGRKLD 246
Query: 263 QMFPKEEVPIGDVVLSVKNLTLNGVFRDVSFDVRAGEILGVAGLVGSGRSNVAETLFGVT 322
+ +G+V L V+ L+ +F DV+F+VR GE++G GLVG+GR+ +AETLFG+
Sbjct: 247 LSRNEAHHELGEVALEVRGLSCGSLFEDVNFEVRRGEVVGFYGLVGAGRTEIAETLFGLR 306
Query: 323 PASSGTIAIDGKEVVIDSANKAIRHRMAFLTEDRKDTGCLLILDILENMQIAVLQDKFVK 382
+SG+I +DG EV I S + AI ++ + EDRK G +L ++ +NM + + D +K
Sbjct: 307 NPTSGSIFLDGAEVAITSPHDAIERGISLVPEDRKGQGLVLGMNCRDNMTLPQVDD--LK 364
Query: 383 RG-FVSEREVTAACEEMSRKLRVKTPNLQERVENLSGGNQQKVLIGRWLLTNPRILILDE 441
G FV++ A ++ KL ++TP ++ V NLSGGNQQK++IG+WL P +LI+DE
Sbjct: 365 AGPFVADGAEIAIFDQYRDKLDIRTPGWKQLVGNLSGGNQQKIVIGKWLSMRPNVLIVDE 424
Query: 442 PTRGIDVGAKAEIHRLVTELARNGVAVIMISSEMPEVLGMSDRIMVMHEGRVTGILDRAE 501
PTRGIDVG+KAEIH L+ +LA G AVI+ISSEMPEVL ++DRI+ M+ GR+ E
Sbjct: 425 PTRGIDVGSKAEIHNLLRDLAAQGYAVIVISSEMPEVLHVADRIVAMYSGRIMRTFTSEE 484
Query: 502 ATQ 504
T+
Sbjct: 485 VTE 487
Score = 103 bits (258), Expect = 1e-26
Identities = 68/228 (29%), Positives = 119/228 (52%), Gaps = 13/228 (5%)
Query: 40 DDVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYPDQGEVKLRGAGIRLKSPLDALENG 99
+DV F+++RG V G GAG++ + + L G+ P G + L GA + + SP DA+E G
Sbjct: 273 EDVNFEVRRGEVVGFYGLVGAGRTEIAETLFGLRNPTSGSIFLDGAEVAITSPHDAIERG 332
Query: 100 IAMIHQELN---LMPFMTVAENIWIRREPKNRFG-FVDHGEMRRMTAKLFERLKIDLDPE 155
I+++ ++ L+ M +N+ + + + G FV G +F++ + LD
Sbjct: 333 ISLVPEDRKGQGLVLGMNCRDNMTLPQVDDLKAGPFVADGA----EIAIFDQYRDKLDIR 388
Query: 156 IE-----VRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTEREVAHLFEIIRDLRSQG 210
V +LS N+Q + I K +S +VLI+DEPT + A + ++RDL +QG
Sbjct: 389 TPGWKQLVGNLSGGNQQKIVIGKWLSMRPNVLIVDEPTRGIDVGSKAEIHNLLRDLAAQG 448
Query: 211 IGIVYITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTRDDIIRMMVG 258
++ I+ +M E+ +AD G+ + T S EVT +++I + G
Sbjct: 449 YAVIVISSEMPEVLHVADRIVAMYSGRIMRTFTSEEVTEENLIAAISG 496
Score = 88.6 bits (218), Expect = 5e-22
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 6/220 (2%)
Query: 291 VSFDVRAGEILGVAGLVGSGRSNVAETLFGVTPASSGTIAIDGKEVVIDSANKAIRHRMA 350
VS + GE+ + G G+G+S + + L G+ G I + + VV+ A +
Sbjct: 26 VSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPDEGQIIVAEQPVVMSGPLDAKAKGIV 85
Query: 351 FLTEDRKDTGCLLILDILENMQIAVLQDKFVKRGFVSEREVTAACEEMSRKLRVKTPNLQ 410
F+ ++ L + EN+ + L K + G V E+ A + KL+V N +
Sbjct: 86 FI---HQELSLADELSVAENIYLGELPRK--RFGLVDWAELEAKTNAILEKLKVGF-NAK 139
Query: 411 ERVENLSGGNQQKVLIGRWLLTNPRILILDEPTRGIDVGAKAEIHRLVTELARNGVAVIM 470
RV +LS NQQ V I R L + + +I DEPT + K + ++++L GV +
Sbjct: 140 TRVGDLSIANQQMVEIARALTVDAKAVIFDEPTASLTDAEKVVLFEVISDLQEQGVGIAY 199
Query: 471 ISSEMPEVLGMSDRIMVMHEGRVTGILDRAEATQIKVMEL 510
IS M E+ ++DRI V+ +G+ G ++ AE + V ++
Sbjct: 200 ISHRMEEIFKITDRISVLRDGQYQGTVNTAETNEENVTQM 239