Pairwise Alignments

Query, 513 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 520 a.a., ABC transporter for L-fucose, ATPase component (from data) from Herbaspirillum seropedicae SmR1

 Score =  483 bits (1244), Expect = e-141
 Identities = 258/511 (50%), Positives = 351/511 (68%), Gaps = 9/511 (1%)

Query: 6   TTMAAVRASGAVPKSEYLLTAEGVRKEFPGVVALDDVEFKLKRGTVHALMGENGAGKSTL 65
           TT  A  +S +VP    ++    V K FPGV+ALD+ +F+L  G VHALMGENGAGKSTL
Sbjct: 9   TTGVAASSSSSVP----VIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTL 64

Query: 66  MKILAGIYYPDQGEVKLRGAGIRLKSPLDALENGIAMIHQELNLMPFMTVAENIWIRREP 125
           MKIL+G+Y  D G++ L G  + +  P  A   GI +IHQELNLM  ++ A+NI+I REP
Sbjct: 65  MKILSGVYQRDSGDILLDGKPVEITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREP 124

Query: 126 KNRFG-FVDHGEMRRMTAKLFERLKIDLDPEIEVRHLSVANRQMVEIAKAVSYESDVLIM 184
           +   G F+D  E+ R  A +F R+++D+DP   V  L+VA +QMVEIAKA+S++S VLIM
Sbjct: 125 RKAMGLFIDEDELNRQAAAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSRVLIM 184

Query: 185 DEPTSALTEREVAHLFEIIRDLRSQGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHLS 244
           DEPT+AL   E+A LF IIRDL++QG+GIVYI+HKM+EL +IAD  SV RDGKYI T   
Sbjct: 185 DEPTAALNNAEIAELFRIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPM 244

Query: 245 NEVTRDDIIRMMVGREI--TQMFPKEEVPIGDVVLSVKNLTLNGVFRDVSFDVRAGEILG 302
            E + D II MMVGR +   Q  P  +    DVVL V+ L      RDVSF +R GEILG
Sbjct: 245 QETSMDTIISMMVGRALDGEQRIP-PDTSRNDVVLEVRGLNRGRAIRDVSFTLRKGEILG 303

Query: 303 VAGLVGSGRSNVAETLFGVTPASSGTIAIDGKEVVIDSANKAIRHRMAFLTEDRKDTGCL 362
            AGL+G+GR+ VA  +FG  P  +G I I G + VI S   A+ H + +L+EDRK  G  
Sbjct: 304 FAGLMGAGRTEVARAIFGADPLEAGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLA 363

Query: 363 LILDILENMQIAVLQDKFVKRGFVSEREVTAACEEMSRKLRVKTPNLQERVENLSGGNQQ 422
           + +D+  N+ ++ +  +F + GF+ +R +  A +   R+L +KTP+++++   LSGGNQQ
Sbjct: 364 VGMDVQANIALSSM-GRFTRVGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQ 422

Query: 423 KVLIGRWLLTNPRILILDEPTRGIDVGAKAEIHRLVTELARNGVAVIMISSEMPEVLGMS 482
           K++I +WLL +  IL  DEPTRGIDVGAK+EI++L+  LA  G A++MISSE+PEVL MS
Sbjct: 423 KIVIAKWLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMS 482

Query: 483 DRIMVMHEGRVTGILDRAEATQIKVMELAAR 513
            R++VM EGR+TG L RA+ATQ K+M+LA +
Sbjct: 483 HRVLVMCEGRITGELARADATQEKIMQLATQ 513



 Score = 91.3 bits (225), Expect = 8e-23
 Identities = 63/229 (27%), Positives = 115/229 (50%), Gaps = 7/229 (3%)

Query: 38  ALDDVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYPDQGEVKLRGAGIRLKSPLDALE 97
           A+ DV F L++G +    G  GAG++ + + + G    + GE+ + G    +KSP DA+ 
Sbjct: 288 AIRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGADPLEAGEIIIHGGKAVIKSPADAVA 347

Query: 98  NGIAMIHQE---LNLMPFMTVAENIWIRREPK-NRFGFVDHGEMRRMTAKLFERLKIDLD 153
           +GI  + ++     L   M V  NI +    +  R GF+D   +R   A+++ R      
Sbjct: 348 HGIGYLSEDRKHFGLAVGMDVQANIALSSMGRFTRVGFMDQRAIRE-AAQMYVRQLAIKT 406

Query: 154 PEIE--VRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTEREVAHLFEIIRDLRSQGI 211
           P +E   R LS  N+Q + IAK +  + D+L  DEPT  +     + +++++  L  QG 
Sbjct: 407 PSVEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGK 466

Query: 212 GIVYITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTRDDIIRMMVGRE 260
            IV I+ ++ E+  ++    V  +G+  G     + T++ I+++   RE
Sbjct: 467 AIVMISSELPEVLRMSHRVLVMCEGRITGELARADATQEKIMQLATQRE 515