Pairwise Alignments

Query, 303 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 290 a.a., integral membrane domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 96.3 bits (238), Expect = 8e-25
 Identities = 80/276 (28%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 21  VVVMLLGMLMFSVNDVMGKWLVATYSVGQVVLIRSIAAALLLAPFLW-VSGPKKLFTLER 79
           ++++LL   + +   ++ K L     V Q+VL R + A LL+ PF+W + G  ++  L R
Sbjct: 4   LLMILLAQWLIATGSLLIKLLDPNTGVFQLVLYRQLFATLLVLPFVWRLQGGLRISPLYR 63

Query: 80  PGLQLARVVASTAEVVAFYFAVVYLPLADVMTYWLAAPIYVAAVSPLVLKEPVGWRRWTA 139
             + + R +        F+ A++ LPLA V      +P+ +  +S   LKE +G+R   A
Sbjct: 64  --VHMVRALLIGLGNGLFFIAIMNLPLASVTAVLYLSPLMLLVMSAAFLKETIGYRHSVA 121

Query: 140 IGIGFVGVVVALEPSSQAFTLPAVISILGSMTFAF--MMISGRSLRGTPDTTLAFWQIVG 197
             IGF G+++  +PSS    L  ++++LG++  A   +++   S    P +TL FW    
Sbjct: 122 GIIGFCGILMISQPSSLNPYL--LLAVLGALISASNNLILKRYSAAEHPFSTL-FWSNAF 178

Query: 198 AAVAGLVWAPFDWTPLKPLDTALICLLGAVAMIAHV-LVNRALKLADAATVAPLQYTLLF 256
           A V  +  A F+   L   D +++ +L A+  +    LV  A + ADA+ +AP +YT L 
Sbjct: 179 AMVFLIPAAVFEGASL-VWDASIVGMLLALFYLGMTYLVIHAYRRADASQLAPAEYTGLV 237

Query: 257 WAIFFGWLIFGDTPRLSMVIGAALIVASGLFIFFRE 292
           +A   G    G+ P    +IG AL++ S +   + E
Sbjct: 238 FATLLGLWFLGEVPNWLSLIGIALVMCSAVLPVYPE 273