Pairwise Alignments

Query, 303 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 345 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score = 67.4 bits (163), Expect = 4e-16
 Identities = 67/298 (22%), Positives = 117/298 (39%), Gaps = 12/298 (4%)

Query: 2   AVDSVPGNLSRENGAARAGVVVMLLGMLMFSVNDVMGKWLVATYSVGQVVLIRSIAAALL 61
           A DS P            GV  +L+  ++F++    G+         Q++ IR  +A + 
Sbjct: 21  APDSAPDGAPDGVHDTARGVAWVLVACVIFTLVYASGRLAGGGVGGLQIMAIRYASALVC 80

Query: 62  LAPF-LWVSGPKKLFTLERPGLQLARVVASTAEVVAFYFAVVYLPLADVMTYWLAAPIYV 120
           +  F L   G        RP    +R +            V  LP+A+     L   ++ 
Sbjct: 81  IVGFALARRGGVSACRSPRPFRHFSRAMMGGLGGACLIQGVTLLPMAEASAIGLLDGVFS 140

Query: 121 AAVSPLVLKEPVGWRRWTAIGIGFVGVVVALEPSSQAFTL-------PAVISILGSMTFA 173
             +  ++L E V   RW  + +  VG V+ +   +    L        AV   L    F 
Sbjct: 141 VILGIVLLGERVRPLRWLGVALSLVGGVLVIAGRADLSGLLDHLLAGGAVFYPLAGAAFV 200

Query: 174 FM---MISGRSLRGTPDTTLAFWQIVGAAVAGLVWAPFDWTPLKPLDTALICLLGAVAMI 230
            M   ++   +LR      L    + G  +   V A   W PL+    AL+   G +A++
Sbjct: 201 AMERVLMRQLALREGKMAILFHVNLFGTLILMPV-ALMTWVPLEGPTLALLIAFGPLALL 259

Query: 231 AHVLVNRALKLADAATVAPLQYTLLFWAIFFGWLIFGDTPRLSMVIGAALIVASGLFI 288
                 R   LA+ +   P+ Y+ L +A   GW++F + P   +++G A+I   G+F+
Sbjct: 260 GQFCNIRGFALAEVSITGPVWYSWLIFAAALGWVMFDEVPGPGVILGGAVIALGGVFL 317