Pairwise Alignments

Query, 303 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 283 a.a., integral membrane domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 96.3 bits (238), Expect = 7e-25
 Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 19  AGVVVMLLGMLMFSVNDVMGKWLVATYSVGQVVLIRSIAAALLLAPFLW-VSGPKKLFTL 77
           A ++++L   L+ +  +++ K L     V Q+VL R + A LL+ PF+W + G  KL   
Sbjct: 2   APLLMILAAQLLIASGNLLVKLLETNTPVFQLVLYRQLFATLLVLPFVWHLQGNLKLSPF 61

Query: 78  ERPGLQLARVVASTAEVVAFYFAVVYLPLADVMTYWLAAPIYVAAVSPLVLKEPVGWRRW 137
            +  L  A ++     +  F  AV++LPLA V     ++P+ +  +S   L E +G+RR 
Sbjct: 62  YKVHLSRALLIGLGNAI--FMLAVLHLPLATVTAVIYSSPLILLLLSAFFLNERIGYRRS 119

Query: 138 TAIGIGFVGVVVALEPSSQAFTLPAVISILGSMTFAF--MMISGRSLRGTPDTTLAFWQI 195
            A  IGF G+++  +P+     L   ++  G+M  A   +++   S    P +TL FW  
Sbjct: 120 VAGLIGFTGILLISQPTE--VNLYIGLAFFGAMISAINSLILKAYSTHEHPFSTL-FWSN 176

Query: 196 VGAAVAGLVWAPFDWTPLKPLDTALICL-LGAVAMIAHVLVNRALKLADAATVAPLQYTL 254
             A V  L+ A +       L  A + L LG   +    L+  A + ADA+ +AP++YT 
Sbjct: 177 AFAMVF-LIPATWYEGANFSLPVAQVGLTLGVFYVGMTYLIIHAYRRADASQMAPVEYTG 235

Query: 255 LFWAIFFGWLIFGDTPRLSMVIGAALIVASGLFIFFREQQLKRQGR 300
           L +A   GW    +T  + + IG  L++ S L   + E + K + R
Sbjct: 236 LIFAALLGWWFLDETLSVVVCIGIGLVIFSSLLPSYGELKAKWKSR 281