Pairwise Alignments

Query, 303 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 307 a.a., integral membrane domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 96.3 bits (238), Expect = 8e-25
 Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 9/272 (3%)

Query: 20  GVVVMLLGMLMFSVNDVMGKWLVATYSVGQVVLIRSIAAALLLAPFLWVSGPKKLFTLER 79
           G++++++G L  +  DV  KWL    +    +L+R I + L+L P +W+   +     E 
Sbjct: 8   GLILLIVGNLFSAFYDVSIKWLPEDANAATFLLVRQITSVLMLTP-IWLYSQRP--QTEH 64

Query: 80  PGLQLARVVASTAEVVAFYFAVVYLPLADVMTYWLAAPIYVAAVSPLVLKEPVGWRRWTA 139
             + L R    +   +     ++ LPLA V + + +AP+ +  +    LKE +   +   
Sbjct: 65  ISVHLWRANIGSVGALFLIIGLMALPLATVSSLFYSAPLMIILMGYWFLKERITTGQVIC 124

Query: 140 IGIGFVGVVVALEPSSQAFTLPAVISILGSMTFAFMMISGRSLRGT--PDTTLAFWQIVG 197
             +GFVG+++ L PS   +   AV  +  + TFA   ++ + +  T  P  TL  + ++G
Sbjct: 125 TLLGFVGILIILRPSEMNWFGLAV--LFSAFTFAVNQLTLKKVPSTEHPVLTLMLYNLLG 182

Query: 198 AAVAGLVWAPFDWTPLKPLDTALICLL-GAVAMIAHVLVNRALKLADAATVAPLQYTLLF 256
              A LV A F        +  ++ LL  A  +I H L   A + A A+ +A  +YT L 
Sbjct: 183 IP-ATLVIAAFQGLEGLSWELLVVALLSNAFLLIYHWLCVLAYRRAQASDIAIAEYTGLL 241

Query: 257 WAIFFGWLIFGDTPRLSMVIGAALIVASGLFI 288
           + +F GWL+F +       +GAALIV   LF+
Sbjct: 242 FIVFLGWLLFDEWLDSLSWLGAALIVLPSLFL 273