Pairwise Alignments

Query, 294 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 273 a.a., DNA end-binding protein, Mku from Mycobacterium tuberculosis H37Rv

 Score =  112 bits (280), Expect = 9e-30
 Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 14/276 (5%)

Query: 4   RASWKGYIRLSLVSCPVRLYPATSASERISFNQLHKDTHNRINMKPVDPELG-LVERSDL 62
           RA W G I   LV+ PV++Y AT A   I F+Q+H   + RI  K V    G +V+  DL
Sbjct: 2   RAIWTGSIAFGLVNVPVKVYSAT-ADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDL 60

Query: 63  VKGYEYEDKKYIIIEDSDLESVRIESNHTMNIEAFVDAGSVDVIYQDAPYYLAPDGAMAE 122
            + YE  D + + I D D+ S+  E +  + +  FV A  VD +  D  Y+L PD + + 
Sbjct: 61  ARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPD-SKSS 119

Query: 123 ETFVVLREALRRSGKLAIARLVLSSRERVVTIGPRETG----MFVCTLRNPNEVRGTADY 178
           +++V+L + L  + ++AI    L ++ R+  +  ++ G    M V TL  P+E+R   D+
Sbjct: 120 KSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIR-DPDF 178

Query: 179 FGNIPVGKPDPEMLQLAEALIEQKTTTFDPKQYEDRYEVALMQMIREKLKGHKPIIAQ-- 236
                  +  P  L++A  +++     F+P +Y D Y+  L ++I  KL+G +   A+  
Sbjct: 179 PVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQ 238

Query: 237 ---APERGNVVNLMDALKASLSQAKPPARSKPKAEP 269
                E  +V +L+  L+AS+ +A+  A S     P
Sbjct: 239 PRLLDEPEDVSDLLAKLEASV-KARSKANSNVPTPP 273