Pairwise Alignments

Query, 294 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 304 a.a., Ku protein from Ralstonia sp. UNC404CL21Col

 Score =  162 bits (410), Expect = 9e-45
 Identities = 102/308 (33%), Positives = 171/308 (55%), Gaps = 21/308 (6%)

Query: 3   PRASWKGYIRLSLVSCPVRLYPATSASERISFNQLHKDTHNRINMKPVDPELGL-VERSD 61
           PR  WKG +   LV  PV LYPAT  S+ + F+ L + T +R+  K ++   G  V R  
Sbjct: 2   PRVIWKGAVSFGLVHIPVALYPATR-SDDLDFDWLDRRTMDRVGYKRINKTTGKEVPREQ 60

Query: 62  LVKGYEYEDKKYIIIEDSDLESVRIESNHTMNIEAFVDAGSVDVIYQDAPYYLAPDGAMA 121
           +V+GY YE  +Y+I+ D D+ +    S  T+++  FVDA  +  +Y D PY+LAPD    
Sbjct: 61  IVRGYAYEKDRYVILTDEDIRAANPVSTQTVDLLTFVDAAEIPFLYLDTPYFLAPD-RRG 119

Query: 122 EETFVVLREALRRSGKLAIARLVLSSRERVVTIGPRETGMFVCTLRNPNEVRGTADYFGN 181
           E+ + +LREAL RS K+ +A +VL +++ +  + P    + + TLR  NEVR  ++   +
Sbjct: 120 EKVYALLREALTRSQKIGVANVVLHTKQHLAALIPMGPVLVLHTLRWSNEVRDWSEL--D 177

Query: 182 IP-----VGKPDPEMLQLAEALIEQKTTTFDPKQYEDRYEVALMQMIREKLK-----GHK 231
           +P       K   + + +AE LI+  +  +DP +Y D +   ++ ++  K++       +
Sbjct: 178 LPEEGAKATKLTAKEIDMAEKLIDDMSGKWDPAEYHDTFRDDILTLVDRKVREGRTESVE 237

Query: 232 PIIAQ--APERGNVVNLMDALKASLS---QAKPPARSKPKAEPAAKEPAAKAAAAKRVTA 286
           P+ A+  AP  GNV++L D L+ SL+   + K  +  + + EPA ++ A + AAAK    
Sbjct: 238 PMEAETAAPRSGNVIDLTDLLRQSLAKRGKGKAASNDEAEDEPAPRKRAPRKAAAK-TAR 296

Query: 287 KPAAKKKA 294
           K A +K+A
Sbjct: 297 KTATRKRA 304