Pairwise Alignments

Query, 294 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 333 a.a., DNA repair protein from Burkholderia phytofirmans PsJN

 Score =  155 bits (391), Expect = 2e-42
 Identities = 102/332 (30%), Positives = 165/332 (49%), Gaps = 42/332 (12%)

Query: 3   PRASWKGYIRLSLVSCPVRLYPATSASERISFNQLHKDTHNRINMKPVDPELGL-VERSD 61
           P   WKG I   LV  PV+LYPAT  SE++ FN L K + + I  K ++   G  V R +
Sbjct: 2   PHMIWKGAISFGLVHVPVQLYPATQ-SEKVGFNLLDKRSIDPIGYKQINKRTGKDVTRDN 60

Query: 62  LVKGYEYEDKKYIIIEDSDLESVRIESNHTMNIEAFVDAGSVDVIYQDAPYYLAPDGAMA 121
           +V+G+EYE  KY+++ D ++ S   ES  T++I AFVDA  +  +Y D PY+L PD    
Sbjct: 61  IVRGFEYEKDKYVVLSDDEIRSANPESTQTVDILAFVDAPDISFLYLDTPYFLTPD-RKG 119

Query: 122 EETFVVLREALRRSGKLAIARLVLSSRERVVTIGPRETGMFVCTLRNPNEVRGTADY--- 178
           E+ + +LREA++ SGK+ +A +VL +++ +  + P    + + TLR   EVR   ++   
Sbjct: 120 EKVYALLREAMKASGKIGVASVVLHNKQHLAALIPVGPVLALNTLRWAAEVRDFDEFKLP 179

Query: 179 FGNIPVGKPDPEMLQLAEALIEQKTTTFDPKQYEDRYEVALMQMIREKLKGHKP---IIA 235
              +         L +A+ LI+  +  +DP QY D +   +M ++  K++  K       
Sbjct: 180 ADGVKAAGVSARELDMAKKLIDDMSDKWDPSQYHDTFRDDIMALVDRKIRAGKTEEITEV 239

Query: 236 QAP----ERGNVVNLMDALKASLSQAK--------------------------PPARSKP 265
           +AP    +  ++++L D LK SL + K                           PAR KP
Sbjct: 240 EAPHESRQSADILDLSDLLKRSLGRGKGKPAAGGRKRTADDDSDEADADAETETPARKKP 299

Query: 266 KAEPAAKEPAAKA---AAAKRVTAKPAAKKKA 294
           +    A +   +    A AK  +A  A K++A
Sbjct: 300 RTTRTASKTTTRGGGRATAKTASAPAARKRRA 331