Pairwise Alignments

Query, 515 a.a., long-chain fatty acid CoA ligase from Sinorhizobium meliloti 1021

Subject, 538 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  291 bits (746), Expect = 3e-83
 Identities = 198/501 (39%), Positives = 270/501 (53%), Gaps = 32/501 (6%)

Query: 27  LGYAELDDLSTRLAAAFAENGVKRNDRVLVFMDNCWEAAAAIFAILKAGATFSPINASTK 86
           L Y  L +   RLA+ F   G++  +RV V  +  ++A AA+FA+  AG  F PIN   K
Sbjct: 38  LTYEGLFNRVCRLASGFKALGLRPGERVAVIAEKRFDAVAAMFAVAHAGGVFVPINPVLK 97

Query: 87  ADKLAYIVADCEAAAILTQAKLMPVVAEALALAP-GHAPFVASTAA-----PGGRIPD-- 138
           + ++ +I+AD  AA IL        VA AL LA   H P  + T       P    PD  
Sbjct: 98  SPQIVHILAD-SAAKIL--------VAPALRLALLDHTPPPSLTTLLRFGDPAPASPDPP 148

Query: 139 -GAASFE-ECLTAAPAPVR-HGGIDVDLGMLIYTSGSTGRPKGVMMTHRNIDAASESITT 195
            G  S + + L  A  P+  H  +D D     YTSGSTG PK V++THRN+ A ++S+ +
Sbjct: 149 PGGESLDLDALAGAGDPIAAHPVVDDDPACFFYTSGSTGLPKAVVVTHRNLIAGAQSVAS 208

Query: 196 YLRNTPDDIILNVLPLAFDYGLYQLLMAIRLGATLVLEKSFAFPQAIFDRIRTERVTGFP 255
            L N PDD +L  LPL FD G  QL  A  +GA  VL   +  PQ +       R+TG  
Sbjct: 209 RLDNRPDDRLLAALPLGFDAGFSQLTTAFAVGAEAVLH-DYLLPQDVITACAHHRITGLT 267

Query: 256 LVPTMAAMILQMRDLEPGFLPSLRYLSNTAAALPPAHIARLRELFPGARLYSMYGLTECK 315
            VP + A + ++ D  P    SLR+L++T  A+P A +ARLR L P AR++ MYGLTE  
Sbjct: 268 GVPPLWAQLARL-DWPPAATASLRFLASTGGAMPAAVLARLRALAPLARIHLMYGLTEAF 326

Query: 316 RCTYLPPEELDRRPGSVGIAIPNTEAFVVDDEGNRVPPGVPGELVIRGPHVMQGYWRNDA 375
           R T L PE + R+PGSVG A+ N E  V+  +G R  P   GE+V RG  V +GYW +  
Sbjct: 327 RSTTLDPERVGRKPGSVGRAVANAEVLVLHPDGGRCAPNEIGEIVHRGAFVAKGYWNDPE 386

Query: 376 ATERMLRP-GPNPWEK-----VLHTGDLFRTDEEGFLYFVGRKDDIIKTRGEKVAPKEVE 429
            T R  RP  P+P E       + +GDL   D+EG L  VGR + +IKT G +V+P E+E
Sbjct: 387 GTARRFRPIPPHPGEPSRPGLAVWSGDLGWQDDEGDLTIVGRSEGLIKTSGYRVSPTEIE 446

Query: 430 TVLHAHPGIAEAVVIGVPDPVLGAAIGALVVLSDPTLTEKD---IIRHCSRHLEDFMVPK 486
              HA   I +AV  G+PDP+LG  + ALVV + P     D   + RH    L  ++VP 
Sbjct: 447 APAHASGLIEDAVAFGLPDPLLGERL-ALVVTAPPGGAPVDLDALRRHLRAQLPAYLVPA 505

Query: 487 IVEFRTELPKTDTGKVSRRLA 507
           ++     LP+T +GK  R  A
Sbjct: 506 LLTQVDSLPRTASGKADRAAA 526