Pairwise Alignments

Query, 1126 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 1085 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  523 bits (1348), Expect = e-152
 Identities = 291/672 (43%), Positives = 413/672 (61%), Gaps = 22/672 (3%)

Query: 11  RREYNRWVANQTLEDYALRFTAKSARRFSSARISQTAIGAISFLALEAIGGAITMSYGTT 70
           RR YN  V N+ +EDY+LR  AKS RR+    ++ TA+G I+F+ALEAIG  + ++ G  
Sbjct: 19  RRIYNALVVNEAIEDYSLRSAAKSFRRWPCWLLANTALGGITFMALEAIGALLVLNNGFV 78

Query: 71  NAIVAILVASLMILIVGLPISRYAIRHGVDIDLLTRGASFGYIGSTITSLIYASFTFILF 130
           N+ +AIL  S +I++ GLPIS YA R+ VDIDLLTRGA FGY GST+TSLIYAS+T I F
Sbjct: 79  NSTLAILCVSAIIILTGLPISYYASRYNVDIDLLTRGAGFGYYGSTVTSLIYASYTIIFF 138

Query: 131 AIEASIMSGALELALGIPLWIGYIVSAVMVIPLVTHGVKLISRFQLVTQPFWIVLNVLPF 190
           AIEA+IM+ AL + LGIP+ +GY++S+V++IPLV +G+  I++ QL TQP W+VL V+ F
Sbjct: 139 AIEAAIMAKALSVGLGIPIHLGYLISSVVIIPLVFYGITFINKLQLYTQPVWVVLTVILF 198

Query: 191 AFIAFADWEKVGLWLAYAGIHHTSGPPGTLASFHLVEFGAASAVIFALTAQIGEQVDFLR 250
           A+I   D   +  W+ Y      +G  G  A F  + FG A +V+F+L  QIGEQVD+LR
Sbjct: 199 AYILTCDPTALDAWVEY------TGKDGMAAGFDPLLFGGALSVLFSLVPQIGEQVDYLR 252

Query: 251 FLP-PDGERKLRHRIAVFLAGSGWVIVGAPKLLAGSFLVVLAL-STGVPSTRAADPAQMY 308
           FLP    E K    +++  AG GW++VG  KLL GSFL V  +   G   + A DP  +Y
Sbjct: 253 FLPDKTPENKGAWWLSMAAAGPGWIVVGCLKLLGGSFLAVYFMQKAGARISDALDPVNLY 312

Query: 309 YTAFGYIFPSDTAALLLMAAFVVVSQLKINVMNAYAGSLAWSNFFSRLTHSHPGRVIWLV 368
           Y  F  +  +    L     FV+V Q+KINV NAYAGSLAWSNFFSR++HSHPGR +WLV
Sbjct: 313 YNGFSALLGTGGLTLATTTIFVIVCQVKINVTNAYAGSLAWSNFFSRISHSHPGRALWLV 372

Query: 369 FNVAIALLLMELGIYRLLEETLGIFSIVAMAWLSTISADLFVNKPLGLAPPGIEFKRAHL 428
           FNV I+LLLM+ G++ LL   L ++++ A++W+  + ADL + KPLGL+P  IE+KRA+L
Sbjct: 373 FNVTISLLLMQFGVFYLLHSVLMVYAMFAVSWVGALFADLVILKPLGLSPRHIEYKRANL 432

Query: 429 YDINPVGLGTMGVSTLFALVAHFGAAGEIAASLAPYIALVTAFVVSPLIAWWTEGKFYLA 488
           Y++NPVG G M +++  +L+ + GA G +  + AP +ALV +   +  IA  T GK+Y+A
Sbjct: 433 YNLNPVGFGAMLMASGVSLLCYRGAFGPLPQAFAPLVALVVSVPTAVGIALLTGGKYYMA 492

Query: 489 RKPRKSWLAESEITCSICEHPFEPEDMAWCPAYAAPICSLCCSLDSRCHDMCKPKARLNT 548
           RK     L  S  TC+ C + +E  DM +CPAY  P+CSLCCSLDS C   CK  A    
Sbjct: 493 RKAEPVSLTAS-TTCTTCGNSYEAGDMVYCPAYDEPVCSLCCSLDSVCGGFCKRLAHATA 551

Query: 549 ---QVATVAKAVLPETVVAKLATRLGRYAISAVISITGIGVILAMIAHQTTAASPETAEV 605
              +    AK  LP   +++ A     +  +   +   I V+       T   SP    +
Sbjct: 552 GRKEAWDEAKIPLPFLHLSRRAKIFCLHFFNIFCAQALIFVLCYAYFRNTGLGSP----L 607

Query: 606 VERTIAIVFFVFAILAGVVSWFYVLAHDSRVVAEEESSRQNTALLKEIAAHKKTDAALQD 665
           +E   A +F   +++ G+  W+  L  ++R+  E+E  R    L +E+   +   A L  
Sbjct: 608 LEEICATIFVFSSLINGIWVWWSSLIQETRLRTEDELDRHIHELNEEVKRREAMSAQL-- 665

Query: 666 AKERAESANRAK 677
               AESA++ +
Sbjct: 666 ----AESASQQR 673



 Score = 60.5 bits (145), Expect = 7e-13
 Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 55/303 (18%)

Query: 640  EESSRQNTALLKEIAAHKKTDAAL--QDAKERAESANRAKSR-----YVVGLSHELRTPL 692
            EE  R +   LKE+    ++   L  ++ +   ES  +A         V G++HE+  P 
Sbjct: 789  EEKLRHSEERLKELNESLESQVRLRTEELERSFESVRQADKMASLGILVAGVAHEINNPS 848

Query: 693  NAV---LGYAQ--------ILERD-----------------ETIPPPRQGAIKAIRRSAD 724
            + +   +G  Q        IL+R+                 ++IP      ++ I + A+
Sbjct: 849  SFIRMNIGLLQSIWDDSIHILDRESKKEDLWIAGMPFDYARKSIPK----LLRGIHQGAE 904

Query: 725  HLSGLIDGLLDISKIEAGKLQVYSNEINIQDFLDQIVDMFRPQAQAKGIAFEHNRAASLP 784
             +S +I  L D ++     +   S  +++   +   +++     +             LP
Sbjct: 905  RVSTIICNLKDYARQVPLDM---SGSVDLNKAVHSALELLTTPLRKATNRLVVETEDGLP 961

Query: 785  QYVRTDDKRLRQILVNLLSNALKFTERG----HIRFDVAYRSQ-VASFTIEDSGRGISEK 839
             + R D +R+ QILVNL+ NA +  +      H+R    YR+     F I D G GI+++
Sbjct: 962  AF-RGDQRRIEQILVNLIQNAYQALQNRRQGIHMR---TYRADGTVCFEIVDEGHGITQE 1017

Query: 840  DLPRIFEPFQRGEAEYRMPGLGLGLTITRLLTQTLGGEISVTSEKDKGTAFKVRLMLSAV 899
             L  I +PF   + +    G GLGL+++  + +  GG +  +SE  +GT   V L   A 
Sbjct: 1018 QLTHICDPFYTTKRD--QGGTGLGLSVSAGIIKEHGGNMQFSSEPGRGTT--VTLRFQAP 1073

Query: 900  DRP 902
            +RP
Sbjct: 1074 ERP 1076