Pairwise Alignments

Query, 356 a.a., catabolite repressor protein from Sinorhizobium meliloti 1021

Subject, 339 a.a., Ribose operon repressor from Pseudomonas fluorescens FW300-N2E2

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 21/335 (6%)

Query: 9   ATIYDLSVLSGSSPSTVSAVLNGTWRKRRIKESTAELIRSLAETHQYTANRQARGLRSSR 68
           ATI D++ L+G S +TVS V+N T   R + E     + +  E   Y  +  AR L++  
Sbjct: 2   ATIKDVAALAGISYTTVSHVVNKT---RPVSEEVRLKVEAAIERLDYVPSAVARSLKAKT 58

Query: 69  SGLVGLLLPVHDNRYFSSLAQTFEAHVRSKGQCPIVVSASRDPEEERRTAETLISYSIDE 128
           +  +GLL+P   N YF+ LA+  E +    G C I+ ++  +P+++R     L+   ID 
Sbjct: 59  TATIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDG 118

Query: 129 LFICGATDPDGVHEVCEAAGLRHINID--LPGTKVPSVISDNFEGGRLLTEAIIRHFPAE 186
           L    A    G+ E         + +D  L G     V  D+  G  L T  ++      
Sbjct: 119 LIFASAGGDVGLAEGLSNVRTPMVIVDRGLEGVDADLVRIDHEYGAYLATRHLLE----- 173

Query: 187 RPLEPDDLYLFGG-RDDHATRERIRGF-RAVKSDLLGADPDECIWPTGYAADNARKAFEA 244
             L   D+   GG  +    + R+ G+ RA+K   +    +  +     +    R A + 
Sbjct: 174 --LGHRDIAFIGGPANTSVAQMRLAGYCRALKEAGIELPVERMLESDFTSTGGYRAAAQL 231

Query: 245 FYEQHGKLPRGFFVNSSINFEGLLRFMAEHPLENFTDLVVGCYDYDPFASFLPFPVIMIR 304
             +Q    P   F  + +   G+LR  AE  +   ++L V  +D    + ++   +  + 
Sbjct: 232 LVQQP---PSAIFAANDMIGIGVLRAAAERNVRVPSELSVIGFDDIQMSRYVYPALTTVG 288

Query: 305 QNIEGMIAKAFEV----IEEPRASLQIHMIEPQLV 335
           Q+I  +   A EV    I  P  + +  ++ P +V
Sbjct: 289 QSILQLGEMAAEVLLRRIATPGLATEQRIVTPSIV 323