Pairwise Alignments

Query, 356 a.a., catabolite repressor protein from Sinorhizobium meliloti 1021

Subject, 331 a.a., catabolite repressor/activator from Pseudomonas sp. BP01

 Score =  107 bits (266), Expect = 6e-28
 Identities = 93/339 (27%), Positives = 151/339 (44%), Gaps = 44/339 (12%)

Query: 13  DLSVLSGSSPSTVSAVLNGTWRKRRIKESTAELIRSLAETHQYTANRQARGLRSSRSGLV 72
           D++ L+G S +T S V+NG   ++RI  +T E +R++ E H +T N QA GLRS  +  +
Sbjct: 5   DIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEAHGFTPNPQAAGLRSRHTRTL 64

Query: 73  GLLLPVHDNRYFSSLAQTFEAHVRSKGQCPIVVSASRDPEEERRTAETLISYSIDELFIC 132
           G +LP  +N  ++ +A+  E   R++G   ++ S+   P+ ER+  +   +   D LF+ 
Sbjct: 65  GFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVA 124

Query: 133 GATDP-DGVHEVCEAAGLRHINID--LPGTKVPSVISDNFEGGRLLTEAIIRHFPAERPL 189
               P D  +   +  GL  I ID  L      SVISD+ +  R L  +++         
Sbjct: 125 SCLPPEDDSYRELQDKGLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLN-------A 177

Query: 190 EPDDLYLFGGRDD-HATRERIRGFRAVKSDLLGADPDECIWPTGYAADNARKAFEAFYEQ 248
            P  + L G R +   ++ R  GF            DE +   GYA +  R   EAF  +
Sbjct: 178 APRSIALIGARPELSVSQARAGGF------------DEAL--QGYAGEVRRYQGEAFSRE 223

Query: 249 HGK------------LPRGFFVNSSINFEGLLRFMAEHPLENFTDLVVGCYDYDPFASFL 296
            G+            LP      S +  +G+   +   P ++   L +G +  +    FL
Sbjct: 224 CGQRLMQQLIHDLGGLPDALVTTSYVLLQGVFDTLQARPADS-RQLQLGTFGDNQLLDFL 282

Query: 297 PFPVIMIRQNIEGMIAK-----AFEVIEEPRASLQIHMI 330
           P PV  + Q   G+IA      A   IEE R    +H +
Sbjct: 283 PLPVNAMAQQ-HGLIAATALELALAAIEEKRYDPGVHAV 320