Pairwise Alignments

Query, 786 a.a., regulatory protein from Sinorhizobium meliloti 1021

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score = 67.0 bits (162), Expect = 3e-15
 Identities = 67/303 (22%), Positives = 122/303 (40%), Gaps = 51/303 (16%)

Query: 235 WARDPKSRPVNGDITQTAPYTDAITGKLIVSFFQPLWSRDRSRVLGAAGTDITLDQLAEI 294
           W +D K+    G +  TAPY D+ +G+++VS   P+      + LG+   D++L +LAE+
Sbjct: 126 WYKDAKNA---GKLVITAPYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAELAEL 182

Query: 295 VENVKVAETGFGFLTMSDGNVVAINPVGEKVIGLRASNAAASGGVTGLDRSLRRSVQPEI 354
           V  VK+ + G+ F+   DG  +A                                 + E 
Sbjct: 183 VNEVKLFDAGYVFIVSEDGTTIA-------------------------------HPKKEF 211

Query: 355 AQLPLGEDGLLKHIFLEENGERVPYLVVLKQLQPTNLWASGPVRREAMLLGIAVPEREIY 414
              P+ E       FL E+   V    V+   +P  + +   V  E   +G+ + E   Y
Sbjct: 212 NGKPMSE-------FLGESKINVDTHQVIINGKPYAV-SFSDVEGEDWYVGVVIDEEIAY 263

Query: 415 ASLFAAQAGISEATNRILIYQVLALLVSLFFVIAAVFAISKRITGGISALANAAKRIEAK 474
           A+L        E     LI+ V+AL++S+F ++  V  + K +     A+ N A      
Sbjct: 264 AAL-------DELRRSTLIFTVIALVISVFVLLFIVRVLMKPLDTLNDAIQNVAS--GEG 314

Query: 475 DYSVRVDIPTRDEVGDAGAAFNRMAEEISFHTENLEQLVEDRTKEIEEANLQISALNQQL 534
           D + R+   T +E       FN   E +       + +  +  +  E  ++ +    + +
Sbjct: 315 DLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEAM 374

Query: 535 RSE 537
           RS+
Sbjct: 375 RSQ 377



 Score = 29.3 bits (64), Expect = 7e-04
 Identities = 73/316 (23%), Positives = 123/316 (38%), Gaps = 37/316 (11%)

Query: 246 GDITQT-APYTDAITGKLIVSF--FQPLWSRD--RSRVLGAA------GTDITLDQLAEI 294
           GD+TQ  +  TD    KL + F  F     +   +S+ +GA        T +TL Q AE 
Sbjct: 314 GDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEA 373

Query: 295 V-----ENVKVAETGFGFLTMSDGNVVAINPVGEKVIGLRASNAAASGGVTGLDRSLRRS 349
           +     E  ++A       T S    VA N  G       A +AAA+G  T +     ++
Sbjct: 374 MRSQLHELEQLATAMHEMATTSSD--VANNAQGAASAAKVADDAAAAG--TDVVTKTTKA 429

Query: 350 VQPEIAQLPLGEDGLLKHIFLEENGERVPYLVVLKQL-QPTNLWASGPVRREAML----L 404
           +    A +    D +        N E V  L V+  +   TNL A       A       
Sbjct: 430 IDTLSATIDAAVDDVKVLESATANIETV--LKVINDIADQTNLLALNAAIEAARAGESGR 487

Query: 405 GIAVPEREIYASLFAAQAGISEATNRILIYQVLALLVSLFFVIAAVFAISKRITGGISAL 464
           G AV   E+       Q   +E  N I   Q  A  V++     A+          ++  
Sbjct: 488 GFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAV-----AMSHSKDTAASAVNQA 542

Query: 465 ANAAKRIEAKDYSVRVDIPTRDEVGDAGAAFNRMAEEISFHTENLEQLVEDRTKEIEEAN 524
             A + +E    +++       ++  A    + +AEEI+ +T  ++ L +   +  +EAN
Sbjct: 543 QGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEAN 602

Query: 525 LQISALNQQLRSENLR 540
                ++ Q+++EN+R
Sbjct: 603 -----MSMQIQTENIR 613