Pairwise Alignments

Query, 190 a.a., permease from Sinorhizobium meliloti 1021

Subject, 183 a.a., TRAP transporter small permease from Rhodopseudomonas palustris CGA009

 Score = 49.7 bits (117), Expect = 3e-11
 Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 12/148 (8%)

Query: 36  VTLAVFWLMAGCVFLQFFT--RYVLNDSYAWTEEIATNCLIGVVFLGSVMCVRLSRHIQV 93
           + LA   L+  C  L +    R + + +  W +E A   L+G  FL +        HI +
Sbjct: 36  LVLAAVALVVACCILSYSVAVRSLFHSATYWQDEAAVFLLVGATFLTAAFVQSQRGHIGI 95

Query: 94  DVLYHYLPLPVARALAIFVDLVRIVFFAYACWLMWRYVAIVAHERMVTVDLPRNI----- 148
           +     LP  V R   + VD+  + F  +  W  W     + HE  V   +  +I     
Sbjct: 96  EAFTGLLPPAVNRVRLLLVDVASLAFCGFFAWKSW----TLTHEAYVDGQVSNSIWSPPL 151

Query: 149 -VFYSVMAGFVLMLIRSIQVFVANQRRG 175
            + Y++MA  + +L   I V + N   G
Sbjct: 152 AIPYALMAAGMTLLCLQIAVQIVNSFNG 179