Pairwise Alignments

Query, 334 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 342 a.a., DNA-binding transcriptional regulator CytR from Klebsiella michiganensis M5al

 Score =  108 bits (270), Expect = 2e-28
 Identities = 88/316 (27%), Positives = 152/316 (48%), Gaps = 11/316 (3%)

Query: 2   PQKPFVSA--QEVAERAGVSRSAVSRTFTPGASVSPETRRRVVEAAEALGYHVNHLARGL 59
           P+K  V+A  ++VA++A VS + VSR       VS  TR RV +AA  +GY    L R +
Sbjct: 3   PKKQVVAATMKDVAQKANVSTATVSRALMNPDKVSQSTRNRVEQAALEVGYLPQSLGRNM 62

Query: 60  MRNESGIVCLIVSEMSTPYRANLIRAMTQQLQNAGKVAMLINTDRSDDSVDLALRQAIRY 119
            RNES  + +IV ++  P+ + +IR +         + ++ +    +      +   I  
Sbjct: 63  KRNESRTILVIVPDICDPFFSEIIRGIEVTAAEQEYLVLIGDCAHQNRQEKTFIDLIITK 122

Query: 120 RADASIIL-SGMP-DRSITQLCLKNGQRLVLINRDDDQQGPLRINLDDAEAAGRVVTAFV 177
           + D  ++L S +P D  + +   +N   +V+ N    +     +++D+  AA   V    
Sbjct: 123 QIDGMLLLGSRLPFDAGVEE--QRNLPPMVMANEFAPELELPTVHIDNLTAAFNAVNYLH 180

Query: 178 RAGCRRLAFANSQAGTPSLMAREHGFVATARAMGL---PVLVERHGPTNYESGRVLAQRL 234
             G RR+         P    R  G+V   R  G+   P  + R G   YE+G    ++L
Sbjct: 181 ELGHRRIGCIAGPEEMPLCHYRLQGYVQALRRSGITVDPHYIAR-GNFTYEAGASALEQL 239

Query: 235 LTLGERPDAVFCATDLLACGFMDAARHQFRVSIPDLLCVAGFDDIEQAAWSSYDLTTFAQ 294
           L L   P A+FC +D++A G +  A+ +  + +P+ L + GFD+I  + +    LTT AQ
Sbjct: 240 LALPVPPTAIFCHSDIMALGALSLAKRR-GLKVPEDLSIIGFDNISLSEFCDPPLTTVAQ 298

Query: 295 PVDRIAQEAVAWLVNE 310
           P   I +EA+  L+++
Sbjct: 299 PRFDIGREAMLLLLDQ 314