Pairwise Alignments

Query, 384 a.a., efflux protein from Sinorhizobium meliloti 1021

Subject, 367 a.a., Efflux transporter, RND family, MFP subunit from Pseudomonas fluorescens FW300-N2E2

 Score =  167 bits (424), Expect = 3e-46
 Identities = 110/350 (31%), Positives = 185/350 (52%), Gaps = 4/350 (1%)

Query: 14  RLLTAILLGAVLSGCSQEKVETKETIRPVKVVEIAAAGEPRELHYSGSVRARTEMNLGFR 73
           +L+  + L  +L+GC  EK   K   R V V +   +     +  +G V+AR + +L FR
Sbjct: 7   KLVVGLGLCVLLAGCGDEKPVEKALPR-VFVQQAVPSEYAASVTLTGDVQARVQADLSFR 65

Query: 74  VGGKITERLVNIGDRVKPGDILARIDATDYRLAVTSAEANLLAAEKQVQTTALAKLRAEQ 133
           VGGKI ER V++G RV    +LAR+D  D +  V SA A + A + +V+ +A A +R ++
Sbjct: 66  VGGKIIERKVDVGARVSARQVLARLDPRDLQTNVDSAAAQVAAEQARVKQSAAAFVRQQK 125

Query: 134 LFTKSFSSQAQLDQATLLYDQAVSTRDAAASSLSQAKNQVSYTDLKADQNGIVTAVNADI 193
           L  K ++SQ++ D A      + S   AA + L+ A+ Q+SYT L A+  GI+TA  A++
Sbjct: 126 LLPKGYTSQSEYDAAQAQLRSSQSALTAAQAQLANAREQLSYTALIAEAPGIITARQAEV 185

Query: 194 GQVVGTGTPVVTVAVDGEKEVEIAVPEIDVTEFKPGKPVGVRFWSNDMLVLDGHVREVSG 253
           GQVV    P+ ++A DGE++    + E  ++E      + +    N  +   G VRE++ 
Sbjct: 186 GQVVQATEPIFSLARDGERDAVFNIYESLLSEPPSDPAIIISLLDNPAIKTTGTVREITP 245

Query: 254 SADQRSRTFSVRVSLPN-DERVLLGMTATVEAAAASSAPLVSIPLSALSKKDGQNIVWIV 312
           +   ++ T  V+V+L +  E + LG   +  A AA       +P SAL+K   +  VW+V
Sbjct: 246 AVSAQTGTVQVKVTLDDLPEGMRLGSVVSATAKAAGKTAF-ELPWSALTKNLSEPAVWLV 304

Query: 313 DRDFSTVHARPIKLADFADNGVRVVDGLGAGDLVVAAGTQFMAEDLKVRL 362
           D +      + + +  +    V V DGL  G+ ++ AG Q +   ++V +
Sbjct: 305 DSE-GKAQLQTVTVGRYLTGKVIVSDGLKGGEKIIIAGGQLLHPGVRVEI 353