Pairwise Alignments

Query, 384 a.a., efflux protein from Sinorhizobium meliloti 1021

Subject, 363 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

 Score =  152 bits (385), Expect = 1e-41
 Identities = 110/349 (31%), Positives = 182/349 (52%), Gaps = 14/349 (4%)

Query: 20  LLGAVLSGCSQEKVETKETIRPVKVVEIAAAGEPRELHYSGSVRARTEMNLGFRVGGKIT 79
           +L   L GC ++K   +   RPV   EI          ++G ++ + E+ LGFRV G++ 
Sbjct: 19  ILIVALPGC-RDKPLREVVERPVLFTEIVDQRSASHGRFAGVIQPQYEVALGFRVAGRLA 77

Query: 80  ERLVNIGDRVKPGDILARIDATDYRLAVTSAEANLLAAEKQVQTTALAKLRAEQLFTKSF 139
            R   IGDRV+ GD+LA ++  D +  + + +A L  A+   Q       R +QL+ +  
Sbjct: 78  SRHAEIGDRVRKGDLLATLEPGDQQHRLRARQAELGKAQSAWQQARDELTRYQQLYERGI 137

Query: 140 SSQAQLDQATLLYDQAVSTRDA----AASSLSQAKNQVSYTDLKADQNGIVTAVNADIGQ 195
            S+A++DQ     D  + T+DA    A  ++ QA + VSYT L A+ +G++T   A++GQ
Sbjct: 138 GSRARMDQ----LDNDLRTQDALRNQARVAVQQAGDHVSYTHLSAEFDGLITGWQAEVGQ 193

Query: 196 VVGTGTPVVTVAVDGEKEVEIAVPEIDVTEFKPGKPVGVRFWSNDMLVLDGHVREVSGSA 255
           V+ TG  VV++A    +E   AV ++ +        + V    N+ L +   VR+++   
Sbjct: 194 VMATGQAVVSLARPDSRE---AVVDLPLGSLDERHRIRVISQINEQLSVAADVRQLAPQI 250

Query: 256 DQRSRTFSVRVSLPND-ERVLLGMTATVEAAAASSAPLVSIPLSALSKKDGQNIVWIVDR 314
           +  +RT  VR++L N  +   LG T TVE +  + A    +P SA+ ++DG   VW++D 
Sbjct: 251 NAETRTQRVRLALQNPADSFRLGSTVTVEISGDAPA-FHELPGSAVLQRDGTYQVWVIDP 309

Query: 315 DFSTVHARPIKLADFADNGVRVVDGLGAGDLVVAAGTQFMAEDLKVRLQ 363
             ST+  R +++   + + VRV   L  G+ VV AG   M    K+RLQ
Sbjct: 310 TTSTLVPRAVQVLARSGSTVRVSGALHEGEKVVTAGVNGMQSGQKIRLQ 358