Pairwise Alignments

Query, 384 a.a., efflux protein from Sinorhizobium meliloti 1021

Subject, 384 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  207 bits (527), Expect = 4e-58
 Identities = 129/339 (38%), Positives = 188/339 (55%), Gaps = 5/339 (1%)

Query: 24  VLSGCSQEKVETKETIRPVKVVEIAAAGEPRELHYSGSVRARTEMNLGFRVGGKITERLV 83
           VL+ C +E  +  E  RP     + AAG+  ++ + G VRAR E + GFR+GGK+ ER V
Sbjct: 16  VLASCGKEAPKAPEP-RPALTQVVGAAGQS-DMLWVGEVRARYETDQGFRIGGKVVERKV 73

Query: 84  NIGDRVKPGDILARIDATDYRLAVTSAEANLLAAEKQVQTTALAKLRAEQLFTKSFSSQA 143
           +IG  VK G ILAR+D  D  L+  +A A   AAE           R ++L  K F SQ+
Sbjct: 74  DIGAVVKKGQILARLDPVDAGLSAAAANAQTKAAEADFLVAKAEYERQKKLLEKQFISQS 133

Query: 144 QLDQATLLYDQAVSTRDAAASSLSQAKNQVSYTDLKADQNGIVTAVNADIGQVVGTGTPV 203
             D     +  A++  D A +  +   NQ  YTDL A+++G+VT V  + GQVV  G P 
Sbjct: 134 AFDSREAQFKAALARLDQARAQAAVTGNQAGYTDLVAEKDGVVTDVKVEPGQVVSAGQPA 193

Query: 204 VTVAVDGEKEVEIAVPEIDVTEFKPGKPVGVRFWSNDMLVLDGHVREVSGSADQRSRTFS 263
           + +A+ G+KEV +AVPE  +   +PG    +R W+N        VREV+ +AD  +R+F 
Sbjct: 194 IRLALAGDKEVVVAVPEGRMKGIEPGTSAVIRLWANQDQSYAARVREVAPAADAATRSFQ 253

Query: 264 VRVS-LPNDERVLLGMTATVEAAAASSAPLVSIPLSALSKKDGQNIVWIVDRDFSTVHAR 322
           V+V+ L  D  + LGMTA V   +A  APL+ +P +AL+++DG+N VW+V+     V  R
Sbjct: 254 VKVTVLEPDAGLRLGMTAGVLIGSA-EAPLL-VPTAALTRQDGKNTVWVVNPQSGEVQPR 311

Query: 323 PIKLADFADNGVRVVDGLGAGDLVVAAGTQFMAEDLKVR 361
            +    F ++GV V  GL  G+ VV AG   +     VR
Sbjct: 312 SVTTGPFREDGVVVEKGLARGERVVIAGVHKLQPGQLVR 350