Pairwise Alignments

Query, 318 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 306 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  226 bits (576), Expect = 5e-64
 Identities = 125/299 (41%), Positives = 176/299 (58%), Gaps = 6/299 (2%)

Query: 8   QKDLR--EETAALRAQILDRLSKLPWDGLSFAHPVPGLSLYRIVEPAGPFSSVYEPSLSF 65
           Q DL   EET A RA +   +  L  D       +  L L R   P+     +++P+L  
Sbjct: 3   QMDLHSAEETLAQRAALARLIDGLVRDDGMHPTAIDDLFLIRCSAPSELVHGLHKPALCI 62

Query: 66  IIKGSKNVRVGNETLVYDEGCFFLTAIGVPVTAQICAASEGEPYVAAALRLDMGKVRRII 125
           I++GSK VR+G+E   YD   + + ++ VPV  ++  AS GEPY+   L +D   V  ++
Sbjct: 63  IVQGSKEVRLGDELYTYDALHYLVVSVTVPVAGRVLEASSGEPYLCIRLDIDPAMVATLV 122

Query: 126 ADHD--IHPTDIPERDLGVAVGTATRELFDALFRLISLASSPADIPFLAGHIQNEILYRL 183
           A+      P + P R  GV +      L DA  RL+ L +SP DIP LA     EI YRL
Sbjct: 123 AESAPLSQPVEGPAR--GVYLDRIDAPLLDATLRLVRLLASPQDIPVLAPLAMREIFYRL 180

Query: 184 LTGEQGARLRRFALAGTHSNRVAKAVLWLKENYTKPLRVEELAEIANMGVSTLHHHFRAM 243
           L G QG  L   A+  +  +RV +A+ WL  NY +PLR+EELA+  N+  STLHH F+A+
Sbjct: 181 LCGRQGRHLHEIAVRDSQGHRVTRAIEWLNRNYVEPLRIEELAQRVNLSSSTLHHRFKAL 240

Query: 244 TAMSPLQFQKHLRLHHARELMLSKSLDAATAALQVGYESPTQFNREYRRAFGHPPLRDI 302
           TAMSPLQ+QK LRL  AR L++++ LD ++A  +VGYESP+QF+REY R FG  P++D+
Sbjct: 241 TAMSPLQYQKQLRLQEARRLLIAEGLDVSSAGYRVGYESPSQFSREYSRLFGASPVKDL 299