Pairwise Alignments

Query, 318 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 288 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  136 bits (343), Expect = 5e-37
 Identities = 82/263 (31%), Positives = 135/263 (51%), Gaps = 5/263 (1%)

Query: 40  VPGLSLYRIVEPAGPFSSVYEPSLSFIIKGSKNVRVGNETLVYDEGCFFLTAIGVPVTAQ 99
           +PG+ L+R           Y   +  + +G K + + N    YD     +  + +PV  +
Sbjct: 22  LPGIKLFRCSAYGARGPLCYSQGIMIVGQGKKRIYLDNRVFDYDPQNTLVMTVPMPVECE 81

Query: 100 ICAASEGEPYVAAALRLDMGKVRRIIADHDIH---PTDIPERDL-GVAVGTATRELFDAL 155
             A+ E EP +   + +D+ ++ R+I   D H   P  + E  L G  +      +  ++
Sbjct: 82  TFASKE-EPVLVMMIDIDLAQLNRLIPVMDNHHRVPQALNESRLPGYFIAPTGEAIECSI 140

Query: 156 FRLISLASSPADIPFLAGHIQNEILYRLLTGEQGARLRRFALAGTHSNRVAKAVLWLKEN 215
            RL+    SP +   L   +  EILYRLL     A L   AL+ T  +R+ KA+ +L ++
Sbjct: 141 HRLLQALQSPLEAEALGEAMVLEILYRLLALPNAAPLYALALSHTRLSRIDKALSYLHKH 200

Query: 216 YTKPLRVEELAEIANMGVSTLHHHFRAMTAMSPLQFQKHLRLHHARELMLSKSLDAATAA 275
           Y   + V++LA + NM  S  H  F+ +TA SP+Q+ K +RL+ A+EL+    +    AA
Sbjct: 201 YAASIEVDQLAALVNMSPSAFHRCFKEVTASSPIQYLKKVRLNKAKELLQRPGVKVKQAA 260

Query: 276 LQVGYESPTQFNREYRRAFGHPP 298
           ++VGYESP QF+RE++R F H P
Sbjct: 261 IEVGYESPAQFSREFKRYFSHSP 283