Pairwise Alignments

Query, 706 a.a., transporter protein from Sinorhizobium meliloti 1021

Subject, 659 a.a., High-affinity choline uptake protein BetT from Xanthomonas campestris pv. campestris strain 8004

 Score =  489 bits (1259), Expect = e-142
 Identities = 263/649 (40%), Positives = 395/649 (60%), Gaps = 22/649 (3%)

Query: 56  PVFVGSVAVIALFVGIGVIAPKRAESIFSGMQTAILSGFGWLYLLSVAVFLFSMLFLAFS 115
           PVFV +  V+  F  +  + P  A  I    QT      GW YLL++ ++L  +L +A S
Sbjct: 16  PVFVLAATVVCTFALLVALFPLDAGRILLDAQTWASRNVGWYYLLAMTLYLVFVLGVALS 75

Query: 116 RYGELKLGPDDSEPEFRYLSWIAMLFAAGMGIGLMYFAVGEPMTHFASPPEAEPLT-IAA 174
            YG +KLG D  EPEF YLSW  MLFAAG+ I L +F V EP+TH+  PP+       A+
Sbjct: 76  SYGNIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHYLQPPQGGTGNGEAS 135

Query: 175 QREAMSVTFFHWGVHAWAIYSVVGLSLAYFGYRYNLPLTVRSGLYPLLKEGIHGPIGHVV 234
            R AM + F HWG+H W ++++  ++LAYF +R+NLPL +RS LYPL+ + I+GPIG+ V
Sbjct: 136 ARLAMQLLFLHWGLHGWGVFALAAMALAYFAFRHNLPLALRSALYPLIGKRINGPIGYTV 195

Query: 235 DIFAICGTMFGLATSLGFGILQINSGLNYLLGIPQSIYVQLLLVTVVTAIATISVVTGVE 294
           D   I  T+FGL   +GFG+L +N+GL  L  +P + +VQ+ L+  +   A +  V+GVE
Sbjct: 196 DALGIVATVFGLGADMGFGVLHLNAGLATLFNVPHTHWVQVALIVAMMGAAILVAVSGVE 255

Query: 295 KGVRILSETNLFLAVLLMLFVLVVGPTGTLMRDFVQNIGLYLDSLVLRTFNIYAYEPRP- 353
           KGVR +S+ N+ LA+ L+LF+L  GPT  L+   +QN+G YL S+V ++F++YAY  RP 
Sbjct: 256 KGVRWMSDINMLLAIALLLFMLFAGPTQYLLNALMQNLGDYLGSVVGKSFDVYAYGGRPD 315

Query: 354 WIDSWTLFYWAWWISWSPFVGMFIARISRGRTVREFVTAVLFVPAMFTFLWMTVFGNTAI 413
           W+ +WT+FYWAWWI W+PFVG+FIARISRGRT+REFV  VL +P  FT  W+++FGN+A+
Sbjct: 316 WLGNWTVFYWAWWIGWAPFVGLFIARISRGRTIREFVLGVLLIPLGFTLAWLSIFGNSAL 375

Query: 414 YVDTTIANGELA---RDVKADLSVALFQFFEYLPWPAVTSTLAVLLVSIFFVTSSDSGSL 470
             D  + +G+ A   + + A  +V L+   +  PW  V  T+ V +  +FFVTS+DSG++
Sbjct: 376 --DQLLHHGQAAWAQQAIDAPQTV-LYSLLQDYPWSRVVITITVAISFVFFVTSADSGTV 432

Query: 471 VIDTIAS-GGETAT--PALQRIFWCSLSGIVAAVLLSTGGLTALQSATISTALPFSLVML 527
           V+ T++S GGE     P   R+FW  L+ +V A LL  G + AL+SA +  +LPFS V+L
Sbjct: 433 VLSTLSSHGGEPHDDGPRWLRVFWGVLTAVVTAGLLLAGSMDALKSAVVLASLPFSAVLL 492

Query: 528 ILVWSLFVGMRADLARTQ----SPGSLGPRAYPASGVPWQRRLAMTLSTPDRRAVEKFLQ 583
           ++ W L   +  +  R +    +P  L  ++    G  W++RL   +    R  V +F+ 
Sbjct: 493 LMAWGLSRALSEESQRKRAQLYNPSPLIGQSRDHRG--WRQRLGQAMHFAARDEVYRFMH 550

Query: 584 ASVLPALEAVARELTRRSRPASVGRDAETGALTLTVPAEGHRDFVYGVQMSEHKLPAFTA 643
             V PA+EAVA +L  +     V    +   + ++V     + F Y V M  +  P+F A
Sbjct: 551 EQVRPAIEAVAAQL--QDEGWQVSSRLDDADMEISVDHGEQQGFRYQVVMRGYLTPSFAA 608

Query: 644 YDATVADVR-YEARTFFSDGSRGYDIMGMADNQIINDVLFQFERYTGFV 691
               + + R Y A  +  +GS+ YD++G +  QIIND++ Q+ER+  F+
Sbjct: 609 --QRLRNQRYYRAEVYLFEGSQDYDLVGYSREQIINDIIDQYERHLQFL 655