Pairwise Alignments

Query, 405 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 396 a.a., conserved hypothetical protein TIGR00275 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 88/410 (21%), Positives = 149/410 (36%), Gaps = 30/410 (7%)

Query: 1   MERKEIAIIGGGPAGLMAAEVLSRSDHAVTVYEAMPTAARKFLLAGKSGLNITHSEDYRD 60
           ++  ++ IIG G AGLM A         V V +    A RK L++G    N T+ +   +
Sbjct: 3   VKHHDVIIIGAGAAGLMCAATAGYRGRDVLVLDNAKQAGRKILISGGGRCNFTNLKV--E 60

Query: 61  FATRFGDASARLRPGLDAFTPRDVRVWAAGLDAETFVGSSGRVFPKAMKASPLLRAWLRR 120
            A         ++  L  +  +           E      G++F     A  ++   L  
Sbjct: 61  PANFICGNPHFVKSALARYPSQQFIELVERHGIEYHERDHGQLFCND-SAKEIVTMLLTE 119

Query: 121 LEAQGVRLLTRHRWSGFAENG---YIFDTPEGKTVVRCDAALLALGGASWPRLGSDAAWM 177
            E  GV +  R       +N    +  +T  G+  + CD+ ++A GG S P+LG+     
Sbjct: 120 CEWAGVSIKLRTDILSVGKNEAGRFELNTSNGE--LSCDSLVIATGGLSMPKLGATPYGY 177

Query: 178 PLLRARGVPISDFRPANCGF-DVAWSEIFRERFAGQPLKGVTATS-----DAGTVSGEFV 231
            L    G+ +    P + G     W    + RF  +PL G+   S     D    S   +
Sbjct: 178 QLAEQFGLKVL---PTHAGLVPFTWHSEDKIRF--EPLSGIAVPSRITAKDGTAFSEALL 232

Query: 232 VTRHGIEGSLVYAHAASLRDRLDRDGTAALLLDLTPGRTAGRLARDLARQDRKASFSNRL 291
            T  G+ G  +   +   +          + ++L P   A +          K S  N L
Sbjct: 233 FTHRGLSGPAILQISNYWK------AGETIKINLLPNMDAAQAIEQQLAAHPKQSLRNTL 286

Query: 292 RKGAGLDPVKA----ALLRELSPEAARAAAEQLAAEIKALPLPVLATRPIAEAISSAGGI 347
                   V+      LL +   +   A   +L  ++    + +  T     A  + GG+
Sbjct: 287 SLWLPKRLVEVLFDEVLLNKALNQLVHAERAKLVDDLHRWTVLMNGTEGYRTAEVTLGGV 346

Query: 348 RLDAIDDRYMLKA-LPGLFAAGEMLDWEAPTGGYLLTACLAMGRAAARGV 396
               +  + M    +PGLF  GE++D     GG+      A G AA + V
Sbjct: 347 DTHELSSKTMEAIKVPGLFFIGEVMDVSGWLGGFNFQWAWASGVAAGKAV 396