Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 229 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

 Score =  105 bits (261), Expect = 9e-28
 Identities = 58/206 (28%), Positives = 111/206 (53%), Gaps = 10/206 (4%)

Query: 8   WNQALRALPQMLDGAVVTLQVAVLSMVIGVACAIALTVFRLSGSRILGGIATTWVEVARN 67
           W   ++ LP  +DGA +TLQ+  +S++ G+  A+ L + R S    +  +   ++   R 
Sbjct: 3   WEIFIKWLPSFIDGAWLTLQLVGVSVIAGLIVAVPLGIARSSRHLAVRALPYGYIFFFRG 62

Query: 68  TPALFQIYMAHFGLGNFGIHLS---------PYTALLVGIAFNNAGYLAENFRGALKAIP 118
           TP L Q+++ ++G+  F +            PY   ++ +  + A Y+AE  RGA++ +P
Sbjct: 63  TPLLVQLFLVYYGMAQFDVVRQSALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQNVP 122

Query: 119 DTQARAGRSLGMTSLQAFRLIVLPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGI 178
             +  A R+LGM+  QA   I+LP+  R+     +N+++  +  ++L  T+ +  +L G+
Sbjct: 123 HGEIEAARALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITL-LELTGM 181

Query: 179 TQELNARSFRTFEFFALAAVIYYLIA 204
            +++ AR++   E F  A +IY LIA
Sbjct: 182 ARKIAARTYLHEEMFLTAGLIYLLIA 207