Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 233 a.a., amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  102 bits (255), Expect = 5e-27
 Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 12/228 (5%)

Query: 4   YTFHWNQALRA--LPQMLDGAVVTLQVAVLSMVIGVACAIALTVFRLSGSRILGGIATTW 61
           YTF WN  L    L  ++ G + T Q++ LS+V+ +     + V RLSG R     +  +
Sbjct: 3   YTFDWNLVLSGERLDWIVQGVITTCQLSGLSLVLAMLLGTLIAVMRLSGVRPFVWFSVAF 62

Query: 62  VEVARNTPALFQIYMAHFGLG-------NFGIHLS--PYTALLVGIAFNNAGYLAENFRG 112
            E  RNTP L QI+  +FG         N  ++     + A ++ +    A ++AE  R 
Sbjct: 63  TEFFRNTPLLVQIFFWYFGSDAVLPDAVNQWLYKQNFEFAAGVISLTVYTAAFIAEEIRS 122

Query: 113 ALKAIPDTQARAGRSLGMTSLQAFRLIVLPQMLRVAFLPATNQMVWAILMTSLGVTVGMN 172
            + +IP TQ  A R+ G++ +QA   +VLPQ  R+   P  +Q +     +SL +T+G+ 
Sbjct: 123 GIFSIPRTQLEASRACGLSFMQAMSYVVLPQAFRIIVPPLISQALNLFKNSSLCMTIGV- 181

Query: 173 TDLAGITQELNARSFRTFEFFALAAVIYYLIAKAVTLAARAFAWRMFR 220
            +L  + +++ + +F  FE F ++ +IY  I+  V+L    +     R
Sbjct: 182 MELTYMARQIESYTFHGFEAFTVSTLIYLCISLMVSLLINLYNTHFLR 229