Pairwise Alignments

Query, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 294 a.a., N-Acetyl-D-glucosamine ABC transport system, permease protein 1 from Xanthomonas campestris pv. campestris strain 8004

 Score =  185 bits (470), Expect = 1e-51
 Identities = 113/290 (38%), Positives = 168/290 (57%), Gaps = 11/290 (3%)

Query: 24  REWIAGYLFVLPDALGLFIFLGVPMALSLVLSV--FEVNGFGGYS---FVGARNYLRMWN 78
           R  +AG++F  P  L L +F GVP+  +LVLSV  F++      S   FVG  NY+ +  
Sbjct: 4   RNSVAGWVFAAPSILVLGMFFGVPVFAALVLSVTDFDLYALADSSHLRFVGLGNYIELLQ 63

Query: 79  DPLFWKGARVTALYAAMLVPLLYVCGLGLALLVQ-RTDRFNAIMRSMFFAPHMVSLVVVA 137
            PLFWK    T  +  + VP+     LG ALL+  +  RF A+ R+  FAP + +LV VA
Sbjct: 64  TPLFWKSLWNTTYFVLLGVPMSIAVSLGAALLLNAKASRFKALFRTALFAPVVTTLVAVA 123

Query: 138 LVWQFMVVDKIGVVSRLTAALDIGGISLLGDPNFALITIVLVSVWFLMGFYMLIFLGGLQ 197
           ++W+++   K G+V+   + L I  I  LGDP +A+ TI+L +VW   G+ M+IFL GLQ
Sbjct: 124 VIWRYLFHIKYGLVNFGLSHLGIAPIDWLGDPRWAMPTIMLFAVWKNFGYNMVIFLAGLQ 183

Query: 198 DIPRQYYEAAMIDGAGAIARFWFITLPLLKPTSFFVIMVSMVAAVAG-AQAFDIIYVMTK 256
            IP+  YEAA IDGA    +F  ITLP+L P    V+MV  V  ++G  Q F   YVMT+
Sbjct: 184 AIPQDLYEAARIDGASRWKQFLHITLPMLGP----VLMVVGVITISGYFQLFAEPYVMTR 239

Query: 257 GGPANATSVLIVYIYQQAFGFGAFGYAAAMASILVVALMIVTAVFFALTR 306
           G P  +T  ++ +++++ F +   G A+A+A +L + ++ VT V     R
Sbjct: 240 GDPLQSTVSVLYFMFEEGFKWWNLGRASAVAFLLFLIILTVTTVMLRFGR 289