Pairwise Alignments

Query, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  150 bits (379), Expect = 4e-41
 Identities = 84/280 (30%), Positives = 147/280 (52%), Gaps = 5/280 (1%)

Query: 29  GYLFVLPDALGLFIFLGVPMALSLVLSVFEVNGFGGY--SFVGARNYLRMWNDPLFWKGA 86
           G+   LP  L L   +  P+  ++  S+F+         +FVG  NY     +  F   +
Sbjct: 20  GWFLTLPGVLMLAATIAFPLLWAVATSLFDFTLIAPTYDTFVGLDNYALALGNTEFLHAS 79

Query: 87  RVTALYAAMLVPLLYVCGLGLALLVQRTDRFNAIMRSMFFAPHMVSLVVVALVWQFMVVD 146
            +T  +   +V + +  G  +AL++    R   I  ++   P +++ VVV LVW+ ++  
Sbjct: 80  WLTVGFVVAVVLIEFAIGFLIALMLNGVRRGKPIYYAILLCPLLINPVVVGLVWRMVLHP 139

Query: 147 KIGVVSRLTAALDIGGISLLGDPNFALITIVLVSVWFLMGFYMLIFLGGLQDIPRQYYEA 206
            +GV +     + +  ++ LGD   A  T+V V +W  + F +++ L GL  +P + YEA
Sbjct: 140 TLGVANYALGLIGLSPVNWLGDVTVAFWTLVGVDIWHQVSFMIVLLLAGLSALPAEPYEA 199

Query: 207 AMIDGAGAIARFWFITLPLLKPTSFFVIMVSMVAAVAGAQAFDIIYVMTKGGPANATSVL 266
           A +DGA    RFW ITLPL++      +++ M+ AV   + +D++Y+MT+GGP  AT ++
Sbjct: 200 ARVDGASVFQRFWHITLPLMRRVILVTLLIRMIFAV---KTYDLVYIMTRGGPGTATDLV 256

Query: 267 IVYIYQQAFGFGAFGYAAAMASILVVALMIVTAVFFALTR 306
              IY+ AF     G A AMA +L++ ++ +TA  + L R
Sbjct: 257 SYSIYRTAFVGLNLGQATAMAGLLLIPVLGITAYLYRLMR 296