Pairwise Alignments

Query, 263 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 24/219 (10%)

Query: 48  LGVS-IIPPYQTYITYE------VYILPGLCGMIQLFNGMQ-SSLALVYDQEMGSMRLLL 99
           LG+  + P ++  + Y       V I+PGL G+I     +  +S A+V ++E G++ LL+
Sbjct: 147 LGIQPLTPTFEITLLYNPSRRSAVNIVPGLLGVILTMTMILFTSAAIVRERERGNLELLI 206

Query: 100 TSPLPRWWLLFSKLLAGVIVSILQVAVFLAIAALTGITVPPVGYVAVL---PALVISGLM 156
           T+P+    L+  K++  + V ++QVA+ L +       VP  G ++ +     L IS  +
Sbjct: 207 TTPVHSIELMIGKIVPYIFVGLIQVAIILGLGHFI-FAVPINGALSQILFGTLLFISASL 265

Query: 157 LGAFGLLISSTVRQLENFAGVMNFVIFPMFFLSSALYPLWKMAESSPLLRDICALNPFTY 216
               GL+IS+          +  F++ P   LS  ++P   M  ++  L +   L P T+
Sbjct: 266 --TLGLVISTIANTQLQAMQMTVFILLPSILLSGFMFPYEGMPTAAQWLSE---LLPATH 320

Query: 217 AVELIRFALYGELNLTAL----AWVGACFVLF--MLAAL 249
            + LIR  +    +L  L     W+ A F LF  MLAAL
Sbjct: 321 FMRLIRGIVLRGADLADLWRDTLWL-ALFTLFGLMLAAL 358