Pairwise Alignments

Query, 259 a.a., ABC transporter from Sinorhizobium meliloti 1021

Subject, 289 a.a., nitrate ABC transporter, permease protein from Pseudomonas stutzeri RCH2

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 9/231 (3%)

Query: 14  PALVRALSLGLL--LLLWIAAAGFTDDASVLPQPWALW-EPFVQAVSSGA-LPYHLGMTL 69
           P LV  L LG++  +L   A A     + V+ + W L  +PF     +   L + L  +L
Sbjct: 40  PPLVILLVLGVIWEMLCSGADAALPPPSQVVAETWELIIDPFYDNGGNDVGLAWQLLASL 99

Query: 70  WRVICAFVPAMVIGVAIGFLMGRVAAVDRWLDPWLVVFLNLPALVLIVLCYIWIGLNETA 129
            RV   ++ A+V GV +G L+G+     R LDP   V   +P L  + L       +  +
Sbjct: 100 QRVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLPLSLAGFQDSHPS 159

Query: 130 AITAVVLNKIPNVATLLREGARALDPDLDSMAAVYRMRPLARLRHVIMPQLAPFIAAAAR 189
           A+  + +  I  +      G R +  D  ++A V ++      + +++P  AP+I    R
Sbjct: 160 ALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEYFKTIMLPAAAPYIFTGLR 219

Query: 190 SGIAVIWKIVLVVEFLGRSSGIGFQIHFYFQLFNVAMV--LVYALSFIGVM 238
            G+ + W  ++  E L    GIGF   F +  +N + +  ++ AL +IGV+
Sbjct: 220 IGVGLSWLAIIAAEMLIGGVGIGF---FIWDAWNASRISDIILALVYIGVV 267